4ICM | pdb_00004icm

Crystal structure of 5-carboxyvanillate decarboxylase LigW from Sphingomonas paucimobilis

External Resource: Annotation


Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
HSCOP2B SuperfamilyMetallo-dependent hydrolases 8097834 3000428 SCOP2B (2022-06-29)
GSCOP2B SuperfamilyMetallo-dependent hydrolases 8097834 3000428 SCOP2B (2022-06-29)
FSCOP2B SuperfamilyMetallo-dependent hydrolases 8097834 3000428 SCOP2B (2022-06-29)
ESCOP2 FamilyPP1699/LP2961-like 8097833 4002329 SCOP2 (2022-06-29)
ESCOP2 SuperfamilyMetallo-dependent hydrolases 8097834 3000428 SCOP2 (2022-06-29)
DSCOP2B SuperfamilyMetallo-dependent hydrolases 8097834 3000428 SCOP2B (2022-06-29)
CSCOP2B SuperfamilyMetallo-dependent hydrolases 8097834 3000428 SCOP2B (2022-06-29)
BSCOP2B SuperfamilyMetallo-dependent hydrolases 8097834 3000428 SCOP2B (2022-06-29)
ASCOP2B SuperfamilyMetallo-dependent hydrolases 8097834 3000428 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
HAmidohydro_2e4icmH1 A: a/b barrelsX: TIM beta/alpha-barrelH: TIM barrels (From Topology)T: TIM barrelsF: Amidohydro_2ECOD (1.6)
GAmidohydro_2e4icmG1 A: a/b barrelsX: TIM beta/alpha-barrelH: TIM barrels (From Topology)T: TIM barrelsF: Amidohydro_2ECOD (1.6)
FAmidohydro_2e4icmF1 A: a/b barrelsX: TIM beta/alpha-barrelH: TIM barrels (From Topology)T: TIM barrelsF: Amidohydro_2ECOD (1.6)
EAmidohydro_2e4icmE1 A: a/b barrelsX: TIM beta/alpha-barrelH: TIM barrels (From Topology)T: TIM barrelsF: Amidohydro_2ECOD (1.6)
DAmidohydro_2e4icmD1 A: a/b barrelsX: TIM beta/alpha-barrelH: TIM barrels (From Topology)T: TIM barrelsF: Amidohydro_2ECOD (1.6)
CAmidohydro_2e4icmC1 A: a/b barrelsX: TIM beta/alpha-barrelH: TIM barrels (From Topology)T: TIM barrelsF: Amidohydro_2ECOD (1.6)
BAmidohydro_2e4icmB1 A: a/b barrelsX: TIM beta/alpha-barrelH: TIM barrels (From Topology)T: TIM barrelsF: Amidohydro_2ECOD (1.6)
AAmidohydro_2e4icmA1 A: a/b barrelsX: TIM beta/alpha-barrelH: TIM barrels (From Topology)T: TIM barrelsF: Amidohydro_2ECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
H3.20.20.140 Alpha Beta Alpha-Beta Barrel TIM Barrel Metal-dependent hydrolasesCATH (4.3.0)
G3.20.20.140 Alpha Beta Alpha-Beta Barrel TIM Barrel Metal-dependent hydrolasesCATH (4.3.0)
F3.20.20.140 Alpha Beta Alpha-Beta Barrel TIM Barrel Metal-dependent hydrolasesCATH (4.3.0)
E3.20.20.140 Alpha Beta Alpha-Beta Barrel TIM Barrel Metal-dependent hydrolasesCATH (4.3.0)
D3.20.20.140 Alpha Beta Alpha-Beta Barrel TIM Barrel Metal-dependent hydrolasesCATH (4.3.0)
C3.20.20.140 Alpha Beta Alpha-Beta Barrel TIM Barrel Metal-dependent hydrolasesCATH (4.3.0)
B3.20.20.140 Alpha Beta Alpha-Beta Barrel TIM Barrel Metal-dependent hydrolasesCATH (4.3.0)
A3.20.20.140 Alpha Beta Alpha-Beta Barrel TIM Barrel Metal-dependent hydrolasesCATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
A, B, C, D, E
PF04909Amidohydrolase (Amidohydro_2)AmidohydrolaseThese proteins are amidohydrolases that are related to Pfam:PF01979 [1]. Domain