7ZTL | pdb_00007ztl

Crystal structure of a covalently linked Aurora-A N-Myc complex

External Resource: Annotation

Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification
Pharos: Disease Associations
Protein Modification Annotation

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
A	SCOP2B Superfamily	Protein kinase-like (PK-like)	8042948	3000066	SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
A	Pkinase_Tyr	e7ztlA1	A: a+b complex topology	X: Protein kinase/SAICAR synthase/ATP-grasp (From Homology)	H: Protein kinase/SAICAR synthase/ATP-grasp	T: Protein kinase	F: Pkinase_Tyr	ECOD (1.6)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A	PF00069	Protein kinase domain (Pkinase)	Protein kinase domain		Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
B	N-myc proto-oncogene protein	DNA binding sequence-specific DNA binding binding double-stranded DNA binding nucleic acid binding RNA polymerase II transcription regulatory region sequence-specific DNA binding cis-regulatory region sequence-specific DNA binding sequence-specific double-stranded DNA binding transcription cis-regulatory region binding transcription regulatory region nucleic acid binding RNA polymerase II cis-regulatory region sequence-specific DNA binding transcription regulator activity DNA-binding transcription factor activity protein binding DNA binding sequence-specific DNA binding binding double-stranded DNA binding nucleic acid binding RNA polymerase II transcription regulatory region sequence-specific DNA binding cis-regulatory region sequence-specific DNA binding sequence-specific double-stranded DNA binding transcription cis-regulatory region binding transcription regulatory region nucleic acid binding RNA polymerase II cis-regulatory region sequence-specific DNA binding transcription regulator activity DNA-binding transcription factor activity protein binding kinase binding enzyme binding DNA-binding transcription factor activity, RNA polymerase II-specific protein dimerization activity DNA-binding transcription activator activity, RNA polymerase II-specific DNA-binding transcription activator activity	multicellular organismal process regulation of cellular process cellular developmental process regulation of developmental process astrocyte differentiation negative regulation of biological process cell development regulation of neurogenesis regulation of cell differentiation regulation of gliogenesis regulation of astrocyte differentiation regulation of cell development regulation of nervous system development multicellular organism development neurogenesis multicellular organismal process regulation of cellular process cellular developmental process regulation of developmental process astrocyte differentiation negative regulation of biological process cell development regulation of neurogenesis regulation of cell differentiation regulation of gliogenesis regulation of astrocyte differentiation regulation of cell development regulation of nervous system development multicellular organism development neurogenesis negative regulation of neurogenesis gliogenesis cell differentiation anatomical structure development negative regulation of cellular process regulation of multicellular organismal process negative regulation of nervous system development negative regulation of cell differentiation system development developmental process regulation of multicellular organismal development regulation of biological process negative regulation of developmental process biological regulation regulation of glial cell differentiation nervous system development negative regulation of astrocyte differentiation negative regulation of gliogenesis negative regulation of cell development negative regulation of glial cell differentiation central nervous system development glial cell differentiation cellular process negative regulation of multicellular organismal process epithelium development tube development branching morphogenesis of an epithelial tube morphogenesis of an epithelium tissue development tissue morphogenesis anatomical structure morphogenesis tube morphogenesis morphogenesis of a branching structure epithelial tube morphogenesis morphogenesis of a branching epithelium regulation of biosynthetic process positive regulation of biological process regulation of macromolecule metabolic process gene expression macromolecule biosynthetic process positive regulation of macromolecule biosynthetic process regulation of gene expression positive regulation of metabolic process biosynthetic process positive regulation of gene expression positive regulation of biosynthetic process regulation of macromolecule biosynthetic process metabolic process positive regulation of macromolecule metabolic process macromolecule metabolic process regulation of metabolic process positive regulation of cellular process animal organ development respiratory tube development lung development respiratory system development positive regulation of mesenchymal cell proliferation cell population proliferation positive regulation of cell population proliferation regulation of mesenchymal cell proliferation regulation of cell population proliferation mesenchymal cell proliferation positive regulation of epithelial cell proliferation regulation of epithelial cell proliferation epithelial cell proliferation embryonic organ morphogenesis chordate embryonic development embryonic morphogenesis embryo development embryo development ending in birth or egg hatching skeletal system development animal organ morphogenesis embryonic skeletal system development skeletal system morphogenesis embryonic organ development embryonic skeletal system morphogenesis cell aggregation connective tissue development cartilage condensation cartilage development positive regulation of DNA-templated transcription RNA metabolic process positive regulation of miRNA transcription positive regulation of miRNA metabolic process regulation of primary metabolic process nucleobase-containing compound metabolic process RNA biosynthetic process DNA-templated transcription nucleic acid biosynthetic process regulation of RNA metabolic process miRNA transcription regulation of miRNA metabolic process regulation of nucleobase-containing compound metabolic process miRNA metabolic process regulation of RNA biosynthetic process positive regulation of nucleobase-containing compound metabolic process primary metabolic process nucleobase-containing compound biosynthetic process nucleic acid metabolic process positive regulation of RNA metabolic process positive regulation of RNA biosynthetic process regulation of DNA-templated transcription regulation of miRNA transcription negative regulation of metabolic process reactive oxygen species metabolic process negative regulation of reactive oxygen species metabolic process regulation of reactive oxygen species metabolic process sensory organ development regulation of epidermal cell differentiation epidermis development epithelial cell differentiation hair cell differentiation regulation of epithelial cell differentiation neuron differentiation inner ear development regulation of mechanoreceptor differentiation regulation of inner ear auditory receptor cell differentiation mechanoreceptor differentiation epidermal cell differentiation ear development inner ear auditory receptor cell differentiation regulation of inner ear receptor cell differentiation inner ear receptor cell differentiation generation of neurons regulation of epidermis development regulation of neuron differentiation sexual reproduction reproductive process cellular process involved in reproduction in multicellular organism developmental process involved in reproduction gamete generation cellular component organization chromatin organization chromatin remodeling cellular component organization or biogenesis epigenetic programming of gene expression epigenetic regulation of gene expression multicellular organismal reproductive process genomic imprinting autosome genomic imprinting germ cell development positive regulation of programmed cell death regulation of programmed cell death cell death programmed cell death transcription by RNA polymerase II regulation of transcription by RNA polymerase II negative regulation of gene expression negative regulation of biosynthetic process negative regulation of macromolecule biosynthetic process negative regulation of macromolecule metabolic process positive regulation of transcription by RNA polymerase II limb development appendage development embryonic limb morphogenesis embryonic appendage morphogenesis appendage morphogenesis embryonic digit morphogenesis limb morphogenesis	membrane-bounded organelle intracellular anatomical structure nucleus membrane-enclosed lumen intracellular membraneless organelle intracellular membrane-bounded organelle nucleolus intracellular organelle lumen intracellular organelle cellular anatomical structure organelle lumen organelle membraneless organelle nuclear lumen membrane-bounded organelle intracellular anatomical structure nucleus membrane-enclosed lumen intracellular membraneless organelle intracellular membrane-bounded organelle nucleolus intracellular organelle lumen intracellular organelle cellular anatomical structure organelle lumen organelle membraneless organelle nuclear lumen nucleoplasm chromatin chromosome
A	Aurora kinase A	binding adenyl ribonucleotide binding nucleotide binding purine ribonucleotide binding purine ribonucleoside triphosphate binding nucleoside phosphate binding ion binding purine nucleotide binding anion binding adenyl nucleotide binding ATP binding heterocyclic compound binding carbohydrate derivative binding ribonucleotide binding binding adenyl ribonucleotide binding nucleotide binding purine ribonucleotide binding purine ribonucleoside triphosphate binding nucleoside phosphate binding ion binding purine nucleotide binding anion binding adenyl nucleotide binding ATP binding heterocyclic compound binding carbohydrate derivative binding ribonucleotide binding small molecule binding catalytic activity, acting on a protein kinase activity protein kinase activity transferase activity catalytic activity phosphotransferase activity, alcohol group as acceptor transferase activity, transferring phosphorus-containing groups ubiquitin protein ligase binding protein binding ubiquitin-like protein ligase binding enzyme binding protein serine/threonine/tyrosine kinase activity protein heterodimerization activity protein dimerization activity protein serine kinase activity kinase binding protein kinase binding protein serine/threonine kinase activity molecular function activator activity molecular function regulator activity histone H3 kinase activity histone modifying activity histone H3S10 kinase activity histone kinase activity	regulation of protein binding regulation of molecular function negative regulation of protein binding regulation of binding negative regulation of binding biological regulation negative regulation of molecular function localization centrosome localization microtubule organizing center localization cellular process cell division apoptotic process cell death regulation of protein binding regulation of molecular function negative regulation of protein binding regulation of binding negative regulation of binding biological regulation negative regulation of molecular function localization centrosome localization microtubule organizing center localization cellular process cell division apoptotic process cell death programmed cell death positive regulation of proteasomal protein catabolic process regulation of cellular process catabolic process positive regulation of protein metabolic process proteolysis involved in protein catabolic process positive regulation of biological process proteasome-mediated ubiquitin-dependent protein catabolic process macromolecule catabolic process regulation of ubiquitin-dependent protein catabolic process regulation of primary metabolic process positive regulation of metabolic process positive regulation of ubiquitin-dependent protein catabolic process regulation of proteolysis regulation of proteolysis involved in protein catabolic process modification-dependent macromolecule catabolic process proteolysis positive regulation of macromolecule metabolic process protein metabolic process positive regulation of cellular process regulation of biological process regulation of protein metabolic process primary metabolic process proteasomal protein catabolic process regulation of macromolecule metabolic process protein catabolic process regulation of catabolic process positive regulation of protein catabolic process positive regulation of proteolysis involved in protein catabolic process positive regulation of catabolic process regulation of proteasomal ubiquitin-dependent protein catabolic process modification-dependent protein catabolic process positive regulation of proteolysis regulation of proteasomal protein catabolic process positive regulation of proteasomal ubiquitin-dependent protein catabolic process metabolic process ubiquitin-dependent protein catabolic process macromolecule metabolic process regulation of metabolic process regulation of protein catabolic process positive regulation of organelle organization regulation of cellular component organization positive regulation of cellular component organization regulation of mitotic nuclear division positive regulation of mitotic nuclear division mitotic cell cycle cellular component organization regulation of mitotic cell cycle positive regulation of cell cycle process cellular component organization or biogenesis cell cycle regulation of cell cycle cell cycle process mitotic nuclear division regulation of cell cycle process organelle fission positive regulation of nuclear division regulation of organelle organization positive regulation of cell cycle organelle organization nuclear division mitotic cell cycle process regulation of nuclear division protein phosphorylation protein autophosphorylation phosphorylation macromolecule modification phosphate-containing compound metabolic process protein modification process phosphorus metabolic process regulation of cytokinesis cytokinesis regulation of cell division regulation of protein stability regulation of biological quality response to stimulus response to stress response to wounding cell cycle G2/M phase transition regulation of cell cycle phase transition regulation of G2/M transition of mitotic cell cycle G2/M transition of mitotic cell cycle regulation of cell cycle G2/M phase transition cell cycle phase transition regulation of mitotic cell cycle phase transition mitotic cell cycle phase transition peptidyl-serine modification peptidyl-serine phosphorylation peptidyl-amino acid modification cellular component disassembly plasma membrane bounded cell projection organization organelle disassembly cell projection organization cilium disassembly cilium organization protein localization to microtubule cytoskeleton protein localization to cytoskeleton protein localization to organelle macromolecule localization protein localization to microtubule organizing center intracellular protein localization protein localization to centrosome negative regulation of programmed cell death regulation of apoptotic process negative regulation of biological process regulation of programmed cell death negative regulation of apoptotic process negative regulation of cellular process meiotic chromosome segregation sexual reproduction reproductive process microtubule cytoskeleton organization membraneless organelle assembly female gamete generation meiotic cell cycle process gamete generation cellular component biogenesis cellular component assembly meiosis I female meiotic nuclear division spindle assembly involved in female meiosis I meiotic nuclear division chromosome segregation spindle organization organelle assembly meiotic cell cycle multicellular organismal reproductive process meiotic spindle organization meiotic spindle assembly spindle assembly meiosis I cell cycle process female meiosis I nuclear chromosome segregation microtubule-based process cytoskeleton organization spindle assembly involved in female meiosis multicellular organismal process cellular developmental process developmental growth plasma membrane bounded cell projection morphogenesis cell development neuron projection development cell growth cell morphogenesis neurogenesis multicellular organism development cell projection morphogenesis neuron differentiation neuron projection morphogenesis cell differentiation anatomical structure development system development developmental process neuron projection extension developmental cell growth growth nervous system development developmental growth involved in morphogenesis generation of neurons anatomical structure morphogenesis neuron development gland development animal organ development animal organ regeneration liver development regeneration hepaticobiliary system development liver regeneration anterior/posterior axis specification anterior/posterior pattern specification pattern specification process axis specification regionalization regulation of developmental process positive regulation of developmental process regulation of anatomical structure morphogenesis mitochondrion organization mitochondrial fission regulation of mitochondrial fission regulation of mitochondrion organization positive regulation of mitochondrial fission microtubule organizing center organization regulation of centrosome cycle regulation of microtubule-based process centrosome cycle mitotic spindle organization microtubule cytoskeleton organization involved in mitosis cellular response to stimulus regulation of signaling signaling regulation of signal transduction signal transduction by p53 class mediator intracellular signal transduction cell communication regulation of intracellular signal transduction regulation of response to stimulus regulation of signal transduction by p53 class mediator regulation of cell communication signal transduction positive regulation of oocyte maturation regulation of reproductive process regulation of oocyte maturation cellular process involved in reproduction in multicellular organism regulation of cell differentiation positive regulation of cell maturation developmental process involved in reproduction regulation of cell development oocyte development positive regulation of cell differentiation cell maturation regulation of cell maturation positive regulation of reproductive process oogenesis positive regulation of cell development developmental maturation anatomical structure maturation germ cell development oocyte maturation oocyte differentiation regulation of biosynthetic process negative regulation of metabolic process gene expression macromolecule biosynthetic process regulation of gene expression negative regulation of gene expression biosynthetic process negative regulation of biosynthetic process negative regulation of macromolecule biosynthetic process regulation of macromolecule biosynthetic process negative regulation of macromolecule metabolic process positive regulation of mitotic cell cycle centrosome separation mitotic centrosome separation	intracellular organelle cellular anatomical structure intracellular anatomical structure cytoskeleton spindle organelle membraneless organelle intracellular membraneless organelle spindle pole microtubule cytoskeleton spindle midzone cytoplasm cytosol cell periphery intracellular organelle cellular anatomical structure intracellular anatomical structure cytoskeleton spindle organelle membraneless organelle intracellular membraneless organelle spindle pole microtubule cytoskeleton spindle midzone cytoplasm cytosol cell periphery basal part of cell membrane plasma membrane basal plasma membrane plasma membrane region basolateral plasma membrane synapse cell junction glutamatergic synapse perinuclear region of cytoplasm mitotic spindle mitotic spindle pole membrane-bounded organelle cilium plasma membrane bounded cell projection ciliary basal body cell projection microtubule organizing center polymeric cytoskeletal fiber supramolecular fiber microtubule supramolecular polymer supramolecular complex midbody nucleus germinal vesicle germ cell nucleus intracellular membrane-bounded organelle female germ cell nucleus centrosome centriole somatodendritic compartment axon cell body neuron projection neuronal cell body axon hillock membrane-enclosed lumen intracellular organelle lumen nucleoplasm organelle lumen nuclear lumen protein-containing complex chromosome passenger complex microtubule associated complex chromosome chromosomal region kinetochore chromosome, centromeric region condensed chromosome, centromeric region condensed chromosome spindle pole centrosome pronucleus postsynaptic density postsynapse neuron to neuron synapse postsynaptic specialization asymmetric synapse meiotic spindle

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
B	IPR050433	Myc family transcription factors	Family
B	IPR002418	Transcription regulator Myc	Family
B	IPR012682	Transcription regulator Myc, N-terminal	Domain
B	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	Domain
B	IPR036638	Helix-loop-helix DNA-binding domain superfamily	Homologous Superfamily
A	IPR000719	Protein kinase domain	Domain
A	IPR017441	Protein kinase, ATP binding site	Binding Site
A	IPR030616	Aurora kinase-like	Family
A	IPR011009	Protein kinase-like domain superfamily	Homologous Superfamily
A	IPR030611	Aurora kinase A	Domain
A	IPR008271	Serine/threonine-protein kinase, active site	Active Site

Pharos: Disease Associations Pharos Homepage Annotation

Chains	Drug Target	Associated Disease
B	Pharos: P04198	medulloblastoma neuroblastoma Feingold syndrome Necrosis adenoid cystic carcinoma skin basal cell carcinoma medullomyoblastoma with myogenic differentiation adult medulloblastoma childhood medulloblastoma kidney Wilms tumor melanotic medulloblastoma cancer salivary gland adenoid cystic carcinoma Feingold syndrome type 1 hyperplasia medulloblastoma neuroblastoma Feingold syndrome Necrosis adenoid cystic carcinoma skin basal cell carcinoma medullomyoblastoma with myogenic differentiation adult medulloblastoma childhood medulloblastoma kidney Wilms tumor melanotic medulloblastoma cancer salivary gland adenoid cystic carcinoma Feingold syndrome type 1 hyperplasia lung cancer peripheral nervous system disease primitive neuroectodermal tumor desmoplastic/nodular medulloblastoma ganglioneuroma intellectual disability malignant glioma retinoblastoma skin pigmented basal cell carcinoma glioblastoma malignant mesothelioma pancreatic intraductal papillary-mucinous carcinoma atypical teratoid rhabdoid tumor esophageal atresia/tracheoesophageal fistula
A	Pharos: O14965	cancer colorectal cancer breast carcinoma melanoma neuroblastoma peripheral neuropathy prostate cancer aneuploidy breast cancer Chromosomal Instability kidney cancer peripheral nervous system disease interstitial cystitis psoriasis kidney neoplasm cancer colorectal cancer breast carcinoma melanoma neuroblastoma peripheral neuropathy prostate cancer aneuploidy breast cancer Chromosomal Instability kidney cancer peripheral nervous system disease interstitial cystitis psoriasis kidney neoplasm lung cancer malignant glioma adrenal cortex carcinoma malignant pancreatic neoplasm atypical teratoid rhabdoid tumor metastatic melanoma non-small cell lung carcinoma cutaneous lupus erythematosus pancreatic intraductal papillary-mucinous carcinoma endometriosis hepatocellular carcinoma invasive ductal breast carcinoma thrombocytopenia due to immune destruction large cell medulloblastoma malignant colon neoplasm medulloblastoma nasopharyngeal carcinoma colorectal carcinoma osteosarcoma cutaneous melanoma pancreatic intraductal papillary-mucinous neoplasm esophageal adenocarcinoma primitive neuroectodermal tumor IgA glomerulonephritis lung adenocarcinoma malignant ependymoma atopic eczema colorectal adenocarcinoma ovarian cancer ductal breast carcinoma in situ glioblastoma prostate adenocarcinoma

Protein Modification Annotation

Modified Residue(s)
Chain	Residue(s)	Description
A	TPO	Parent Component: THR RESID: AA0038 PSI-MOD : O-phospho-L-threonine MOD:00047

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729.