9JFN | pdb_00009jfn

Arginine decarboxylase in Aspergillus oryzae complexed with agmatine

External Resource: Annotation

Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification
Protein Modification Annotation

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A, C [auth B], E [auth C], G [auth D]	PF12588	Phophatidylserine decarboxylase (PSDC)	Phophatidylserine decarboxylase	-	Family
A, C [auth B], E [auth C], G [auth D]	PF02666	Phosphatidylserine decarboxylase (PS_Dcarbxylase)	Phosphatidylserine decarboxylase	-	Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
B [auth E], D [auth F], F [auth G], H	L-tryptophan decarboxylase PsiD-like domain-containing protein	phosphatidylserine decarboxylase activity carboxy-lyase activity lyase activity catalytic activity carbon-carbon lyase activity	glycerophospholipid biosynthetic process phosphatidylethanolamine metabolic process glycerophospholipid metabolic process lipid biosynthetic process primary metabolic process phospholipid biosynthetic process phospholipid metabolic process phosphatidylethanolamine biosynthetic process biosynthetic process glycerolipid biosynthetic process organophosphate metabolic process organophosphate biosynthetic process phosphate-containing compound metabolic process metabolic process glycerophospholipid biosynthetic process phosphatidylethanolamine metabolic process glycerophospholipid metabolic process lipid biosynthetic process primary metabolic process phospholipid biosynthetic process phospholipid metabolic process phosphatidylethanolamine biosynthetic process biosynthetic process glycerolipid biosynthetic process organophosphate metabolic process organophosphate biosynthetic process phosphate-containing compound metabolic process metabolic process cellular process glycerolipid metabolic process phosphorus metabolic process lipid metabolic process	membrane-bounded organelle intracellular organelle cellular anatomical structure intracellular anatomical structure mitochondrion organelle cytoplasm intracellular membrane-bounded organelle
A, C [auth B], E [auth C], G [auth D]	L-tryptophan decarboxylase PsiD-like domain-containing protein	phosphatidylserine decarboxylase activity carboxy-lyase activity lyase activity catalytic activity carbon-carbon lyase activity	glycerophospholipid biosynthetic process phosphatidylethanolamine metabolic process glycerophospholipid metabolic process lipid biosynthetic process primary metabolic process phospholipid biosynthetic process phospholipid metabolic process phosphatidylethanolamine biosynthetic process biosynthetic process glycerolipid biosynthetic process organophosphate metabolic process organophosphate biosynthetic process phosphate-containing compound metabolic process metabolic process glycerophospholipid biosynthetic process phosphatidylethanolamine metabolic process glycerophospholipid metabolic process lipid biosynthetic process primary metabolic process phospholipid biosynthetic process phospholipid metabolic process phosphatidylethanolamine biosynthetic process biosynthetic process glycerolipid biosynthetic process organophosphate metabolic process organophosphate biosynthetic process phosphate-containing compound metabolic process metabolic process cellular process glycerolipid metabolic process phosphorus metabolic process lipid metabolic process	membrane-bounded organelle intracellular organelle cellular anatomical structure intracellular anatomical structure mitochondrion organelle cytoplasm intracellular membrane-bounded organelle

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
B [auth E], D [auth F], F [auth G], H	IPR003817	Phosphatidylserine decarboxylase-related	Family
B [auth E], D [auth F], F [auth G], H	IPR022237	L-tryptophan decarboxylase PsiD-like	Domain
A, C [auth B], E [auth C], G [auth D]	IPR003817	Phosphatidylserine decarboxylase-related	Family
A, C [auth B], E [auth C], G [auth D]	IPR022237	L-tryptophan decarboxylase PsiD-like	Domain

Protein Modification Annotation

Modified Residue(s)
Chain	Residue(s)	Description
B [auth E], D [auth F], F [auth G], H	PYR	RESID: AA0127 PSI-MOD : pyruvic acid (Cys) MOD:00136 , pyruvic acid (Ser) MOD:00807 , pyruvic acid MOD:01154 , pyruvic acid (Tyr) MOD:01661

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729.