4V5S | pdb_00004v5s

The crystal structure of EF-Tu and G24A-tRNA-Trp bound to a cognate codon on the 70S ribosome.

External Resource: Annotation


Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
PB [auth CI]SCOP2B SuperfamilyRibosomal protein S5 domain 2-like 8037678 3000100 SCOP2B (2022-06-29)
I [auth AI]SCOP2B SuperfamilyRibosomal protein S5 domain 2-like 8037678 3000100 SCOP2B (2022-06-29)
NB [auth CG]SCOP2B SuperfamilyRibosomal protein S7 8033523 3000799 SCOP2B (2022-06-29)
G [auth AG]SCOP2B SuperfamilyRibosomal protein S7 8033523 3000799 SCOP2B (2022-06-29)
MD [auth DY]SCOP2B SuperfamilyTranslation proteins SH3-like KOW motif containing domain 8033223 3000334 SCOP2B (2022-06-29)
FB [auth BY]SCOP2B SuperfamilyTranslation proteins SH3-like KOW motif containing domain 8033223 3000334 SCOP2B (2022-06-29)
LD [auth DX]SCOP2B SuperfamilyRibosomal proteins S24e, L23 and L15e 8033219 3000210 SCOP2B (2022-06-29)
EB [auth BX]SCOP2B SuperfamilyRibosomal proteins S24e, L23 and L15e 8033219 3000210 SCOP2B (2022-06-29)
KD [auth DW]SCOP2B SuperfamilyRibosomal protein L22 8033220 3001078 SCOP2B (2022-06-29)
DB [auth BW]SCOP2B SuperfamilyRibosomal protein L22 8033220 3001078 SCOP2B (2022-06-29)
JD [auth DV]SCOP2B Superfamilyl21p-like 8033218 3002005 SCOP2B (2022-06-29)
CB [auth BV]SCOP2B Superfamilyl21p-like 8033218 3002005 SCOP2B (2022-06-29)
ID [auth DU]SCOP2B SuperfamilyRibosomal protein L20 8033216 3000563 SCOP2B (2022-06-29)
BB [auth BU]SCOP2B SuperfamilyRibosomal protein L20 8033216 3000563 SCOP2B (2022-06-29)
HD [auth DT]SCOP2B SuperfamilyTranslation proteins SH3-like KOW motif containing domain 8033214 3000334 SCOP2B (2022-06-29)
AB [auth BT]SCOP2B SuperfamilyTranslation proteins SH3-like KOW motif containing domain 8033214 3000334 SCOP2B (2022-06-29)
ZA [auth BS]SCOP2B SuperfamilyTranslational machinery components 8033211 3000571 SCOP2B (2022-06-29)
GD [auth DS]SCOP2B SuperfamilyTranslational machinery components 8033211 3000571 SCOP2B (2022-06-29)
YA [auth BR]SCOP2B SuperfamilyProkaryotic ribosomal protein L17 8032744 3000995 SCOP2B (2022-06-29)
FD [auth DR]SCOP2B SuperfamilyProkaryotic ribosomal protein L17 8032744 3000995 SCOP2B (2022-06-29)
LB [auth CE]SCOP2B SuperfamilyRibosomal protein S5 domain 2-like 8044015 3000100 SCOP2B (2022-06-29)
LB [auth CE]SCOP2B SuperfamilydsRNA-binding domain-like 8044017 3000985 SCOP2B (2022-06-29)
E [auth AE]SCOP2B SuperfamilydsRNA-binding domain-like 8044017 3000985 SCOP2B (2022-06-29)
E [auth AE]SCOP2B SuperfamilyRibosomal protein S5 domain 2-like 8044015 3000100 SCOP2B (2022-06-29)
XA [auth BQ]SCOP2B SuperfamilyRibosomal protein L16p/L10e 8043627 3000884 SCOP2B (2022-06-29)
ED [auth DQ]SCOP2B SuperfamilyRibosomal protein L16p/L10e 8043627 3000884 SCOP2B (2022-06-29)
WA [auth BP]SCOP2B SuperfamilyRibosomal proteins L15p and L18e 8033207 3001045 SCOP2B (2022-06-29)
DD [auth DP]SCOP2B SuperfamilyRibosomal proteins L15p and L18e 8033207 3001045 SCOP2B (2022-06-29)
VA [auth BO]SCOP2B Superfamily50S Ribosomal protein L14-like 8042936 3000433 SCOP2B (2022-06-29)
CD [auth DO]SCOP2B Superfamily50S Ribosomal protein L14-like 8042936 3000433 SCOP2B (2022-06-29)
UA [auth BN]SCOP2B SuperfamilyRibosomal protein L13 8033205 3001134 SCOP2B (2022-06-29)
BD [auth DN]SCOP2B SuperfamilyRibosomal protein L13 8033205 3001134 SCOP2B (2022-06-29)
YC [auth DH]SCOP2B SuperfamilyRibosomal protein L6 8033202 3000724 SCOP2B (2022-06-29)
YC [auth DH]SCOP2B SuperfamilyRibosomal protein L6 8033203 3000724 SCOP2B (2022-06-29)
RA [auth BH]SCOP2B SuperfamilyRibosomal protein L6 8033203 3000724 SCOP2B (2022-06-29)
RA [auth BH]SCOP2B SuperfamilyRibosomal protein L6 8033202 3000724 SCOP2B (2022-06-29)
WC [auth DF]SCOP2B SuperfamilyRibosomal protein L4 8033198 3001146 SCOP2B (2022-06-29)
PA [auth BF]SCOP2B SuperfamilyRibosomal protein L4 8033198 3001146 SCOP2B (2022-06-29)
VC [auth DE]SCOP2B SuperfamilyTranslational proteins 8033197 3000811 SCOP2B (2022-06-29)
OA [auth BE]SCOP2B SuperfamilyTranslational proteins 8033197 3000811 SCOP2B (2022-06-29)
KB [auth CD]SCOP2B SuperfamilyAlpha-L RNA-binding motif 8044014 3001473 SCOP2B (2022-06-29)
D [auth AD]SCOP2B SuperfamilyAlpha-L RNA-binding motif 8044014 3001473 SCOP2B (2022-06-29)
UC [auth DD]SCOP2B SuperfamilyTranslation proteins SH3-like KOW motif containing domain 8033194 3000334 SCOP2B (2022-06-29)
UC [auth DD]SCOP2B SuperfamilyNucleic acid-binding proteins 8033195 3000135 SCOP2B (2022-06-29)
NA [auth BD]SCOP2B SuperfamilyNucleic acid-binding proteins 8033195 3000135 SCOP2B (2022-06-29)
NA [auth BD]SCOP2B SuperfamilyTranslation proteins SH3-like KOW motif containing domain 8033194 3000334 SCOP2B (2022-06-29)
PC [auth D8]SCOP2B SuperfamilyL35p-like 8033192 3000790 SCOP2B (2022-06-29)
IA [auth B8]SCOP2B SuperfamilyL35p-like 8033192 3000790 SCOP2B (2022-06-29)
NC [auth D6]SCOP2B SuperfamilyZn-binding ribosomal proteins 8033191 3001320 SCOP2B (2022-06-29)
GA [auth B6]SCOP2B SuperfamilyZn-binding ribosomal proteins 8033191 3001320 SCOP2B (2022-06-29)
MC [auth D5]SCOP2B SuperfamilyZn-binding ribosomal proteins 8033190 3001320 SCOP2B (2022-06-29)
FA [auth B5]SCOP2B SuperfamilyZn-binding ribosomal proteins 8033190 3001320 SCOP2B (2022-06-29)
LC [auth D4]SCOP2B SuperfamilyL28p-like 8033189 3001966 SCOP2B (2022-06-29)
EA [auth B4]SCOP2B SuperfamilyL28p-like 8033189 3001966 SCOP2B (2022-06-29)
JB [auth CC]SCOP2B SuperfamilyRibosomal protein S3 C-terminal domain 8044012 3001053 SCOP2B (2022-06-29)
JB [auth CC]SCOP2B SuperfamilyProkaryotic type KH domain (KH-domain type II) 8044011 3001043 SCOP2B (2022-06-29)
C [auth AC]SCOP2B SuperfamilyRibosomal protein S3 C-terminal domain 8044012 3001053 SCOP2B (2022-06-29)
C [auth AC]SCOP2B SuperfamilyProkaryotic type KH domain (KH-domain type II) 8044011 3001043 SCOP2B (2022-06-29)
JC [auth D2]SCOP2B SuperfamilyRibosomal protein L29 (L29p) 8042933 3000713 SCOP2B (2022-06-29)
CA [auth B2]SCOP2B SuperfamilyRibosomal protein L29 (L29p) 8042933 3000713 SCOP2B (2022-06-29)
IC [auth D1]SCOP2B SuperfamilyL28p-like 8042932 3001966 SCOP2B (2022-06-29)
BA [auth B1]SCOP2B SuperfamilyL28p-like 8042932 3001966 SCOP2B (2022-06-29)
HC [auth D0]SCOP2B SuperfamilyRibosomal L27 protein-like 8041210 3000539 SCOP2B (2022-06-29)
AA [auth B0]SCOP2B SuperfamilyRibosomal L27 protein-like 8041210 3000539 SCOP2B (2022-06-29)
Z [auth AZ]SCOP2B SuperfamilyEF-Tu post-G domain-like 8056513 3002024 SCOP2B (2022-06-29)
Z [auth AZ]SCOP2B SuperfamilyEF-Tu post-G domain-like 8056511 3002024 SCOP2B (2022-06-29)
Z [auth AZ]SCOP2B SuperfamilyRas-like P-loop GTPases 8056510 3002022 SCOP2B (2022-06-29)
GC [auth CZ]SCOP2B SuperfamilyEF-Tu post-G domain-like 8056513 3002024 SCOP2B (2022-06-29)
GC [auth CZ]SCOP2B SuperfamilyEF-Tu post-G domain-like 8056511 3002024 SCOP2B (2022-06-29)
GC [auth CZ]SCOP2B SuperfamilyRas-like P-loop GTPases 8056510 3002022 SCOP2B (2022-06-29)
T [auth AT]SCOP2B SuperfamilyRibosomal protein S20 8044029 3001362 SCOP2B (2022-06-29)
AC [auth CT]SCOP2B SuperfamilyRibosomal protein S20 8044029 3001362 SCOP2B (2022-06-29)
IB [auth CB]SCOP2B SuperfamilySIS domain/Ribosomal protein S2-like 8044010 3001397 SCOP2B (2022-06-29)
B [auth AB]SCOP2B SuperfamilySIS domain/Ribosomal protein S2-like 8044010 3001397 SCOP2B (2022-06-29)
ZB [auth CS]SCOP2B SuperfamilyRibosomal protein S19 8044027 3000686 SCOP2B (2022-06-29)
S [auth AS]SCOP2B SuperfamilyRibosomal protein S19 8044027 3000686 SCOP2B (2022-06-29)
YB [auth CR]SCOP2B SuperfamilyRibosomal protein S18 8044028 3001191 SCOP2B (2022-06-29)
R [auth AR]SCOP2B SuperfamilyRibosomal protein S18 8044028 3001191 SCOP2B (2022-06-29)
XB [auth CQ]SCOP2B SuperfamilyNucleic acid-binding proteins 8044026 3000135 SCOP2B (2022-06-29)
Q [auth AQ]SCOP2B SuperfamilyNucleic acid-binding proteins 8044026 3000135 SCOP2B (2022-06-29)
WB [auth CP]SCOP2B SuperfamilyRibosomal protein S16 8044025 3000680 SCOP2B (2022-06-29)
P [auth AP]SCOP2B SuperfamilyRibosomal protein S16 8044025 3000680 SCOP2B (2022-06-29)
UB [auth CN]SCOP2B SuperfamilyGlucocorticoid receptor-like (DNA-binding domain) 8052585 3000068 SCOP2B (2022-06-29)
N [auth AN]SCOP2B SuperfamilyGlucocorticoid receptor-like (DNA-binding domain) 8052585 3000068 SCOP2B (2022-06-29)
TB [auth CM]SCOP2B SuperfamilyS13-like H2TH domain 8003708 3000053 SCOP2B (2022-06-29)
M [auth AM]SCOP2B SuperfamilyS13-like H2TH domain 8003708 3000053 SCOP2B (2022-06-29)
SB [auth CL]SCOP2B SuperfamilyNucleic acid-binding proteins 8044021 3000135 SCOP2B (2022-06-29)
L [auth AL]SCOP2B SuperfamilyNucleic acid-binding proteins 8044021 3000135 SCOP2B (2022-06-29)
RB [auth CK]SCOP2B SuperfamilyTranslational machinery components 8044020 3000571 SCOP2B (2022-06-29)
K [auth AK]SCOP2B SuperfamilyTranslational machinery components 8044020 3000571 SCOP2B (2022-06-29)
QB [auth CJ]SCOP2B SuperfamilyRibosomal protein S10 8044019 3001336 SCOP2B (2022-06-29)
J [auth AJ]SCOP2B SuperfamilyRibosomal protein S10 8044019 3001336 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
PB [auth CI]Ribosomal_S9e4v5sCI1 A: a+b two layersX: Ribosomal protein S5 domain 2-like (From Topology)H: Ribosomal protein S5 domain 2-like (From Topology)T: Ribosomal protein S5 domain 2-likeF: Ribosomal_S9ECOD (1.6)
I [auth AI]Ribosomal_S9e4v5sAI1 A: a+b two layersX: Ribosomal protein S5 domain 2-like (From Topology)H: Ribosomal protein S5 domain 2-like (From Topology)T: Ribosomal protein S5 domain 2-likeF: Ribosomal_S9ECOD (1.6)
OB [auth CH]Ribosomal_S8_Ne4v5sCH1 A: a+b two layersX: R3H domain-likeH: Ribosomal protein S8, N-terminal domain (From Topology)T: Ribosomal protein S8, N-terminal domainF: Ribosomal_S8_NECOD (1.6)
OB [auth CH]Ribosomal_S8_Ce4v5sCH2 A: a+b two layersX: Ribosomal protein S8, C-terminal domain (From Topology)H: Ribosomal protein S8, C-terminal domain (From Topology)T: Ribosomal protein S8, C-terminal domainF: Ribosomal_S8_CECOD (1.6)
H [auth AH]Ribosomal_S8_Ne4v5sAH1 A: a+b two layersX: R3H domain-likeH: Ribosomal protein S8, N-terminal domain (From Topology)T: Ribosomal protein S8, N-terminal domainF: Ribosomal_S8_NECOD (1.6)
H [auth AH]Ribosomal_S8_Ce4v5sAH2 A: a+b two layersX: Ribosomal protein S8, C-terminal domain (From Topology)H: Ribosomal protein S8, C-terminal domain (From Topology)T: Ribosomal protein S8, C-terminal domainF: Ribosomal_S8_CECOD (1.6)
NB [auth CG]Ribosomal_S7_1e4v5sCG1 A: alpha arraysX: Ribosomal protein S7 (From Topology)H: Ribosomal protein S7 (From Topology)T: Ribosomal protein S7F: Ribosomal_S7_1ECOD (1.6)
G [auth AG]Ribosomal_S7_1e4v5sAG1 A: alpha arraysX: Ribosomal protein S7 (From Topology)H: Ribosomal protein S7 (From Topology)T: Ribosomal protein S7F: Ribosomal_S7_1ECOD (1.6)
MB [auth CF]Ribosomal_S6e4v5sCF1 A: a+b two layersX: Alpha-beta plaitsH: Ribosomal protein S6 (From Topology)T: Ribosomal protein S6F: Ribosomal_S6ECOD (1.6)
F [auth AF]Ribosomal_S6e4v5sAF1 A: a+b two layersX: Alpha-beta plaitsH: Ribosomal protein S6 (From Topology)T: Ribosomal protein S6F: Ribosomal_S6ECOD (1.6)
ND [auth DZ]Ribosomal_L25pe4v5sDZ2 A: beta barrelsX: Ribosomal protein L25-likeH: Ribosomal protein L25-like (From Topology)T: Ribosomal protein L25-likeF: Ribosomal_L25pECOD (1.6)
ND [auth DZ]Ribosomal_TL5_Ce4v5sDZ1 A: a+b complex topologyX: Ribosomal protein TL5/L25 C-terminal domain-likeH: Ribosomal protein TL5/L25 C-terminal domain-related (From Topology)T: Ribosomal protein TL5/L25 C-terminal domain-relatedF: Ribosomal_TL5_CECOD (1.6)
GB [auth BZ]Ribosomal_L25pe4v5sBZ2 A: beta barrelsX: Ribosomal protein L25-likeH: Ribosomal protein L25-like (From Topology)T: Ribosomal protein L25-likeF: Ribosomal_L25pECOD (1.6)
GB [auth BZ]Ribosomal_TL5_Ce4v5sBZ1 A: a+b complex topologyX: Ribosomal protein TL5/L25 C-terminal domain-likeH: Ribosomal protein TL5/L25 C-terminal domain-related (From Topology)T: Ribosomal protein TL5/L25 C-terminal domain-relatedF: Ribosomal_TL5_CECOD (1.6)
MD [auth DY]ribosomal_L24e4v5sDY1 A: beta barrelsX: SH3H: SH3T: SH3F: ribosomal_L24ECOD (1.6)
FB [auth BY]ribosomal_L24e4v5sBY1 A: beta barrelsX: SH3H: SH3T: SH3F: ribosomal_L24ECOD (1.6)
LD [auth DX]Ribosomal_L23_2e4v5sDX1 A: a+b two layersX: Alpha-beta plaitsH: Ribosomal proteins S24e, L23 and L15e (From Topology)T: Ribosomal proteins S24e, L23 and L15eF: Ribosomal_L23_2ECOD (1.6)
EB [auth BX]Ribosomal_L23_2e4v5sBX1 A: a+b two layersX: Alpha-beta plaitsH: Ribosomal proteins S24e, L23 and L15e (From Topology)T: Ribosomal proteins S24e, L23 and L15eF: Ribosomal_L23_2ECOD (1.6)
KD [auth DW]Ribosomal_L22e4v5sDW1 A: a+b two layersX: Enolase-N/ribosomal proteinH: Ribosomal protein L22 (From Topology)T: Ribosomal protein L22F: Ribosomal_L22ECOD (1.6)
DB [auth BW]Ribosomal_L22e4v5sBW1 A: a+b two layersX: Enolase-N/ribosomal proteinH: Ribosomal protein L22 (From Topology)T: Ribosomal protein L22F: Ribosomal_L22ECOD (1.6)
JD [auth DV]Ribosomal_L21pe4v5sDV1 A: beta barrelsX: Ribosomal protein L21p (From Topology)H: Ribosomal protein L21p (From Topology)T: Ribosomal protein L21pF: Ribosomal_L21pECOD (1.6)
CB [auth BV]Ribosomal_L21pe4v5sBV1 A: beta barrelsX: Ribosomal protein L21p (From Topology)H: Ribosomal protein L21p (From Topology)T: Ribosomal protein L21pF: Ribosomal_L21pECOD (1.6)
ID [auth DU]Ribosomal_L20e4v5sDU1 A: alpha arraysX: PABP domain-likeH: Ribosomal protein L20 (From Topology)T: Ribosomal protein L20F: Ribosomal_L20ECOD (1.6)
BB [auth BU]Ribosomal_L20e4v5sBU1 A: alpha arraysX: PABP domain-likeH: Ribosomal protein L20 (From Topology)T: Ribosomal protein L20F: Ribosomal_L20ECOD (1.6)
HD [auth DT]Ribosomal_L19e4v5sDT1 A: beta barrelsX: SH3H: SH3T: SH3F: Ribosomal_L19ECOD (1.6)
AB [auth BT]Ribosomal_L19e4v5sBT1 A: beta barrelsX: SH3H: SH3T: SH3F: Ribosomal_L19ECOD (1.6)
ZA [auth BS]Ribosomal_L18pe4v5sBS1 A: mixed a+b and a/bX: Ribonuclease H-likeH: Ribonuclease H-like (From Topology)T: Ribonuclease H-likeF: Ribosomal_L18pECOD (1.6)
GD [auth DS]Ribosomal_L18pe4v5sDS1 A: mixed a+b and a/bX: Ribonuclease H-likeH: Ribonuclease H-like (From Topology)T: Ribonuclease H-likeF: Ribosomal_L18pECOD (1.6)
YA [auth BR]Ribosomal_L17_1e4v5sBR1 A: a+b two layersX: Enolase-N/ribosomal proteinH: Prokaryotic ribosomal protein L17 (From Topology)T: Prokaryotic ribosomal protein L17F: Ribosomal_L17_1ECOD (1.6)
FD [auth DR]Ribosomal_L17_1e4v5sDR1 A: a+b two layersX: Enolase-N/ribosomal proteinH: Prokaryotic ribosomal protein L17 (From Topology)T: Prokaryotic ribosomal protein L17F: Ribosomal_L17_1ECOD (1.6)
LB [auth CE]Ribosomal_S5_Ce4v5sCE1 A: a+b two layersX: Ribosomal protein S5 domain 2-like (From Topology)H: Ribosomal protein S5 domain 2-like (From Topology)T: Ribosomal protein S5 domain 2-likeF: Ribosomal_S5_CECOD (1.6)
LB [auth CE]Ribosomal_S5e4v5sCE2 A: a+b two layersX: dsRBD-likeH: dsRNA-binding domain-like (From Topology)T: dsRNA-binding domain-likeF: Ribosomal_S5ECOD (1.6)
E [auth AE]Ribosomal_S5_Ce4v5sAE1 A: a+b two layersX: Ribosomal protein S5 domain 2-like (From Topology)H: Ribosomal protein S5 domain 2-like (From Topology)T: Ribosomal protein S5 domain 2-likeF: Ribosomal_S5_CECOD (1.6)
E [auth AE]Ribosomal_S5e4v5sAE2 A: a+b two layersX: dsRBD-likeH: dsRNA-binding domain-like (From Topology)T: dsRNA-binding domain-likeF: Ribosomal_S5ECOD (1.6)
XA [auth BQ]Ribosomal_L16e4v5sBQ1 A: a+b complex topologyX: alpha/beta-Hammerhead/Barrel-sandwich hybridH: alpha/beta-Hammerhead/Barrel-sandwich hybridT: Ribosomal protein L10eF: Ribosomal_L16ECOD (1.6)
ED [auth DQ]Ribosomal_L16e4v5sDQ1 A: a+b complex topologyX: alpha/beta-Hammerhead/Barrel-sandwich hybridH: alpha/beta-Hammerhead/Barrel-sandwich hybridT: Ribosomal protein L10eF: Ribosomal_L16ECOD (1.6)
WA [auth BP]Ribosomal_L27Ae4v5sBP1 A: a/b three-layered sandwichesX: Ribosomal protein L13/L15p/L18e/L32eH: Ribosomal proteins L15p and L18e (From Topology)T: Ribosomal proteins L15p and L18eF: Ribosomal_L27AECOD (1.6)
DD [auth DP]Ribosomal_L27Ae4v5sDP1 A: a/b three-layered sandwichesX: Ribosomal protein L13/L15p/L18e/L32eH: Ribosomal proteins L15p and L18e (From Topology)T: Ribosomal proteins L15p and L18eF: Ribosomal_L27AECOD (1.6)
VA [auth BO]Ribosomal_L14e4v5sBO1 A: beta barrelsX: Ribosomal protein L14-likeH: Ribosomal protein L14-related (From Topology)T: Ribosomal protein L14-relatedF: Ribosomal_L14ECOD (1.6)
CD [auth DO]Ribosomal_L14e4v5sDO1 A: beta barrelsX: Ribosomal protein L14-likeH: Ribosomal protein L14-related (From Topology)T: Ribosomal protein L14-relatedF: Ribosomal_L14ECOD (1.6)
UA [auth BN]Ribosomal_L13e4v5sBN1 A: a/b three-layered sandwichesX: Ribosomal protein L13/L15p/L18e/L32eH: Ribosomal protein L13 and L16-A (From Topology)T: Ribosomal protein L13 and L16-AF: Ribosomal_L13ECOD (1.6)
BD [auth DN]Ribosomal_L13e4v5sDN1 A: a/b three-layered sandwichesX: Ribosomal protein L13/L15p/L18e/L32eH: Ribosomal protein L13 and L16-A (From Topology)T: Ribosomal protein L13 and L16-AF: Ribosomal_L13ECOD (1.6)
YC [auth DH]Ribosomal_L6e4v5sDH2 A: a+b two layersX: Ribosomal protein L6 (From Topology)H: Ribosomal protein L6 (From Topology)T: Ribosomal protein L6F: Ribosomal_L6ECOD (1.6)
YC [auth DH]Ribosomal_L6_1e4v5sDH1 A: a+b two layersX: Ribosomal protein L6 (From Topology)H: Ribosomal protein L6 (From Topology)T: Ribosomal protein L6F: Ribosomal_L6_1ECOD (1.6)
RA [auth BH]Ribosomal_L6e4v5sBH2 A: a+b two layersX: Ribosomal protein L6 (From Topology)H: Ribosomal protein L6 (From Topology)T: Ribosomal protein L6F: Ribosomal_L6ECOD (1.6)
RA [auth BH]Ribosomal_L6_1e4v5sBH1 A: a+b two layersX: Ribosomal protein L6 (From Topology)H: Ribosomal protein L6 (From Topology)T: Ribosomal protein L6F: Ribosomal_L6_1ECOD (1.6)
XC [auth DG]Ribosomal_L5_Ce4v5sDG1 A: a+b two layersX: Ribosomal protein L5 (From Topology)H: Ribosomal protein L5 (From Topology)T: Ribosomal protein L5F: Ribosomal_L5_CECOD (1.6)
QA [auth BG]Ribosomal_L5_Ce4v5sBG1 A: a+b two layersX: Ribosomal protein L5 (From Topology)H: Ribosomal protein L5 (From Topology)T: Ribosomal protein L5F: Ribosomal_L5_CECOD (1.6)
WC [auth DF]Ribosomal_L4e4v5sDF1 A: a/b three-layered sandwichesX: Ribosomal protein L4 (From Topology)H: Ribosomal protein L4 (From Topology)T: Ribosomal protein L4F: Ribosomal_L4ECOD (1.6)
PA [auth BF]Ribosomal_L4e4v5sBF1 A: a/b three-layered sandwichesX: Ribosomal protein L4 (From Topology)H: Ribosomal protein L4 (From Topology)T: Ribosomal protein L4F: Ribosomal_L4ECOD (1.6)
VC [auth DE]Ribosomal_L3e4v5sDE1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: Alanine racemase-CF: Ribosomal_L3ECOD (1.6)
OA [auth BE]Ribosomal_L3e4v5sBE1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: Alanine racemase-CF: Ribosomal_L3ECOD (1.6)
KB [auth CD]S4e4v5sCD1 A: a+b two layersX: beta-GraspH: Ubiquitin-relatedT: Alpha-L RNA-binding motifF: S4ECOD (1.6)
D [auth AD]S4e4v5sAD1 A: a+b two layersX: beta-GraspH: Ubiquitin-relatedT: Alpha-L RNA-binding motifF: S4ECOD (1.6)
UC [auth DD]Ribosomal_L2_1e4v5sDD2 A: beta barrelsX: OB-foldH: Nucleic acid-binding proteins (From Topology)T: Nucleic acid-binding proteinsF: Ribosomal_L2_1ECOD (1.6)
UC [auth DD]Ribosomal_L2_Ce4v5sDD1 A: beta barrelsX: SH3H: SH3T: SH3F: Ribosomal_L2_CECOD (1.6)
NA [auth BD]Ribosomal_L2_1e4v5sBD2 A: beta barrelsX: OB-foldH: Nucleic acid-binding proteins (From Topology)T: Nucleic acid-binding proteinsF: Ribosomal_L2_1ECOD (1.6)
NA [auth BD]Ribosomal_L2_Ce4v5sBD1 A: beta barrelsX: SH3H: SH3T: SH3F: Ribosomal_L2_CECOD (1.6)
TC [auth DC]Ribosomal_L1_2nd_1e4v5sDC1 A: a+b two layersX: a+b domain in Ribosomal protein L1 (From Topology)H: a+b domain in Ribosomal protein L1 (From Topology)T: a+b domain in Ribosomal protein L1F: Ribosomal_L1_2nd_1ECOD (1.6)
TC [auth DC]Ribosomal_L1_1ste4v5sDC2 A: a/b three-layered sandwichesX: Flavodoxin-likeH: Rossmann-like domain in Ribosomal protein L1 (From Topology)T: Rossmann-like domain in Ribosomal protein L1F: Ribosomal_L1_1stECOD (1.6)
MA [auth BC]Ribosomal_L1_2nd_1e4v5sBC1 A: a+b two layersX: a+b domain in Ribosomal protein L1 (From Topology)H: a+b domain in Ribosomal protein L1 (From Topology)T: a+b domain in Ribosomal protein L1F: Ribosomal_L1_2nd_1ECOD (1.6)
MA [auth BC]Ribosomal_L1_1ste4v5sBC2 A: a/b three-layered sandwichesX: Flavodoxin-likeH: Rossmann-like domain in Ribosomal protein L1 (From Topology)T: Rossmann-like domain in Ribosomal protein L1F: Ribosomal_L1_1stECOD (1.6)
QC [auth D9]Ribosomal_L36e4v5sD91 A: few secondary structure elementsX: Ribosomal protein L36 (From Topology)H: Ribosomal protein L36 (From Topology)T: Ribosomal protein L36F: Ribosomal_L36ECOD (1.6)
JA [auth B9]Ribosomal_L36e4v5sB91 A: few secondary structure elementsX: Ribosomal protein L36 (From Topology)H: Ribosomal protein L36 (From Topology)T: Ribosomal protein L36F: Ribosomal_L36ECOD (1.6)
PC [auth D8]Ribosomal_L35pe4v5sD81 A: a+b two layersX: Ribosomal protein L35p (From Topology)H: Ribosomal protein L35p (From Topology)T: Ribosomal protein L35pF: Ribosomal_L35pECOD (1.6)
IA [auth B8]Ribosomal_L35pe4v5sB81 A: a+b two layersX: Ribosomal protein L35p (From Topology)H: Ribosomal protein L35p (From Topology)T: Ribosomal protein L35pF: Ribosomal_L35pECOD (1.6)
OC [auth D7]Ribosomal_L34e4v5sD71 A: extended segmentsX: 50S ribosomal protein L34 (From Topology)H: 50S ribosomal protein L34 (From Topology)T: 50S ribosomal protein L34F: Ribosomal_L34ECOD (1.6)
HA [auth B7]Ribosomal_L34e4v5sB71 A: extended segmentsX: 50S ribosomal protein L34 (From Topology)H: 50S ribosomal protein L34 (From Topology)T: 50S ribosomal protein L34F: Ribosomal_L34ECOD (1.6)
NC [auth D6]Ribosomal_L33e4v5sD61 A: few secondary structure elementsX: Rubredoxin-likeH: Rubredoxin-relatedT: Rubredoxin-relatedF: Ribosomal_L33ECOD (1.6)
GA [auth B6]Ribosomal_L33e4v5sB61 A: few secondary structure elementsX: Rubredoxin-likeH: Rubredoxin-relatedT: Rubredoxin-relatedF: Ribosomal_L33ECOD (1.6)
MC [auth D5]Ribosomal_L32pe4v5sD51 A: few secondary structure elementsX: Rubredoxin-likeH: Rubredoxin-relatedT: Rubredoxin-relatedF: Ribosomal_L32pECOD (1.6)
FA [auth B5]Ribosomal_L32pe4v5sB51 A: few secondary structure elementsX: Rubredoxin-likeH: Rubredoxin-relatedT: Rubredoxin-relatedF: Ribosomal_L32pECOD (1.6)
LC [auth D4]Ribosomal_L31e4v5sD41 A: few secondary structure elementsX: Ribosomal protein L31p (From Topology)H: Ribosomal protein L31p (From Topology)T: Ribosomal protein L31pF: Ribosomal_L31ECOD (1.6)
EA [auth B4]Ribosomal_L31e4v5sB41 A: few secondary structure elementsX: Ribosomal protein L31p (From Topology)H: Ribosomal protein L31p (From Topology)T: Ribosomal protein L31pF: Ribosomal_L31ECOD (1.6)
JB [auth CC]Ribosomal_S3_Ce4v5sCC1 A: a+b two layersX: T-foldH: Ribosomal protein S3-C (From Topology)T: Ribosomal protein S3-CF: Ribosomal_S3_CECOD (1.6)
JB [auth CC]KH_2_1e4v5sCC2 A: a+b two layersX: Alpha-lytic protease prodomain-likeH: KH-domainsT: Prokaryotic type KH domain (KH-domain type II)F: KH_2_1ECOD (1.6)
C [auth AC]Ribosomal_S3_Ce4v5sAC1 A: a+b two layersX: T-foldH: Ribosomal protein S3-C (From Topology)T: Ribosomal protein S3-CF: Ribosomal_S3_CECOD (1.6)
C [auth AC]KH_2_1e4v5sAC2 A: a+b two layersX: Alpha-lytic protease prodomain-likeH: KH-domainsT: Prokaryotic type KH domain (KH-domain type II)F: KH_2_1ECOD (1.6)
KC [auth D3]Ribosomal_L30e4v5sD31 A: a+b two layersX: Ribosomal protein L30p/L7e (From Topology)H: Ribosomal protein L30p/L7e (From Topology)T: Ribosomal protein L30p/L7eF: Ribosomal_L30ECOD (1.6)
DA [auth B3]Ribosomal_L30e4v5sB31 A: a+b two layersX: Ribosomal protein L30p/L7e (From Topology)H: Ribosomal protein L30p/L7e (From Topology)T: Ribosomal protein L30p/L7eF: Ribosomal_L30ECOD (1.6)
JC [auth D2]Ribosomal_L29e4v5sD21 A: alpha bundlesX: Long alpha-hairpinH: Ribosomal protein L29 (L29p) (From Topology)T: Ribosomal protein L29 (L29p)F: Ribosomal_L29ECOD (1.6)
CA [auth B2]Ribosomal_L29e4v5sB21 A: alpha bundlesX: Long alpha-hairpinH: Ribosomal protein L29 (L29p) (From Topology)T: Ribosomal protein L29 (L29p)F: Ribosomal_L29ECOD (1.6)
IC [auth D1]Ribosomal_L28e4v5sD11 A: few secondary structure elementsX: Ribosomal protein bL28-related (From Homology)H: Ribosomal protein bL28-relatedT: Ribosomal protein L28F: Ribosomal_L28ECOD (1.6)
BA [auth B1]Ribosomal_L28e4v5sB11 A: few secondary structure elementsX: Ribosomal protein bL28-related (From Homology)H: Ribosomal protein bL28-relatedT: Ribosomal protein L28F: Ribosomal_L28ECOD (1.6)
HC [auth D0]Ribosomal_L27e4v5sD01 A: a+b complex topologyX: alpha/beta-Hammerhead/Barrel-sandwich hybridH: alpha/beta-Hammerhead/Barrel-sandwich hybridT: Ribosomal L27 proteinF: Ribosomal_L27ECOD (1.6)
AA [auth B0]Ribosomal_L27e4v5sB01 A: a+b complex topologyX: alpha/beta-Hammerhead/Barrel-sandwich hybridH: alpha/beta-Hammerhead/Barrel-sandwich hybridT: Ribosomal L27 proteinF: Ribosomal_L27ECOD (1.6)
Z [auth AZ]GTP_EFTU_D2_1e4v5sAZ1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: Alanine racemase-CF: GTP_EFTU_D2_1ECOD (1.6)
Z [auth AZ]GTP_EFTU_D3e4v5sAZ2 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: Aminomethyltransferase beta-barrel domainF: GTP_EFTU_D3ECOD (1.6)
Z [auth AZ]MnmE_helical_2nde4v5sAZ3 A: a/b three-layered sandwichesX: P-loop domains-likeH: P-loop domains-relatedT: P-loop containing nucleoside triphosphate hydrolasesF: MnmE_helical_2ndECOD (1.6)
GC [auth CZ]GTP_EFTU_D2_1e4v5sCZ1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: Alanine racemase-CF: GTP_EFTU_D2_1ECOD (1.6)
GC [auth CZ]GTP_EFTU_D3e4v5sCZ2 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: Aminomethyltransferase beta-barrel domainF: GTP_EFTU_D3ECOD (1.6)
GC [auth CZ]MnmE_helical_2nde4v5sCZ3 A: a/b three-layered sandwichesX: P-loop domains-likeH: P-loop domains-relatedT: P-loop containing nucleoside triphosphate hydrolasesF: MnmE_helical_2ndECOD (1.6)
T [auth AT]Ribosomal_S20pe4v5sAT1 A: alpha bundlesX: Spectrin repeat-likeH: Ribosomal protein S20 (From Topology)T: Ribosomal protein S20F: Ribosomal_S20pECOD (1.6)
AC [auth CT]Ribosomal_S20pe4v5sCT1 A: alpha bundlesX: Spectrin repeat-likeH: Ribosomal protein S20 (From Topology)T: Ribosomal protein S20F: Ribosomal_S20pECOD (1.6)
IB [auth CB]Ribosomal_S2e4v5sCB1 A: a/b three-layered sandwichesX: Flavodoxin-likeH: Ribosomal protein S2/SIS domain (From Topology)T: Ribosomal protein S2/SIS domainF: Ribosomal_S2ECOD (1.6)
B [auth AB]Ribosomal_S2e4v5sAB1 A: a/b three-layered sandwichesX: Flavodoxin-likeH: Ribosomal protein S2/SIS domain (From Topology)T: Ribosomal protein S2/SIS domainF: Ribosomal_S2ECOD (1.6)
ZB [auth CS]Ribosomal_S19e4v5sCS1 A: a+b two layersX: Ribosomal protein S19 (From Topology)H: Ribosomal protein S19 (From Topology)T: Ribosomal protein S19F: Ribosomal_S19ECOD (1.6)
S [auth AS]Ribosomal_S19e4v5sAS1 A: a+b two layersX: Ribosomal protein S19 (From Topology)H: Ribosomal protein S19 (From Topology)T: Ribosomal protein S19F: Ribosomal_S19ECOD (1.6)
YB [auth CR]Ribosomal_S18e4v5sCR1 A: alpha arraysX: HTHH: HTHT: tri-helicalF: Ribosomal_S18ECOD (1.6)
R [auth AR]Ribosomal_S18e4v5sAR1 A: alpha arraysX: HTHH: HTHT: tri-helicalF: Ribosomal_S18ECOD (1.6)
XB [auth CQ]Ribosomal_S17_1e4v5sCQ1 A: beta barrelsX: OB-foldH: Nucleic acid-binding proteins (From Topology)T: Nucleic acid-binding proteinsF: Ribosomal_S17_1ECOD (1.6)
Q [auth AQ]Ribosomal_S17_1e4v5sAQ1 A: beta barrelsX: OB-foldH: Nucleic acid-binding proteins (From Topology)T: Nucleic acid-binding proteinsF: Ribosomal_S17_1ECOD (1.6)
WB [auth CP]Ribosomal_S16_1e4v5sCP1 A: a+b two layersX: Ribosomal protein S16 (From Topology)H: Ribosomal protein S16 (From Topology)T: Ribosomal protein S16F: Ribosomal_S16_1ECOD (1.6)
P [auth AP]Ribosomal_S16_1e4v5sAP1 A: a+b two layersX: Ribosomal protein S16 (From Topology)H: Ribosomal protein S16 (From Topology)T: Ribosomal protein S16F: Ribosomal_S16_1ECOD (1.6)
VB [auth CO]Ribosomal_S15_1e4v5sCO1 A: alpha arraysX: S15/NS1 RNA-binding domain (From Topology)H: S15/NS1 RNA-binding domain (From Topology)T: S15/NS1 RNA-binding domainF: Ribosomal_S15_1ECOD (1.6)
O [auth AO]Ribosomal_S15_1e4v5sAO1 A: alpha arraysX: S15/NS1 RNA-binding domain (From Topology)H: S15/NS1 RNA-binding domain (From Topology)T: S15/NS1 RNA-binding domainF: Ribosomal_S15_1ECOD (1.6)
UB [auth CN]Ribosomal_S14e4v5sCN1 A: few secondary structure elementsX: Glucocorticoid receptor-likeH: LIM domain-likeT: LIM domain-likeF: Ribosomal_S14ECOD (1.6)
N [auth AN]Ribosomal_S14e4v5sAN1 A: few secondary structure elementsX: Glucocorticoid receptor-likeH: LIM domain-likeT: LIM domain-likeF: Ribosomal_S14ECOD (1.6)
TB [auth CM]Ribosomal_S13_1e4v5sCM1 A: alpha arraysX: HhH/H2THH: H2TH (From Topology)T: H2THF: Ribosomal_S13_1ECOD (1.6)
M [auth AM]Ribosomal_S13_1e4v5sAM1 A: alpha arraysX: HhH/H2THH: H2TH (From Topology)T: H2THF: Ribosomal_S13_1ECOD (1.6)
SB [auth CL]Ribosom_S12_S23e4v5sCL1 A: beta barrelsX: OB-foldH: Nucleic acid-binding proteins (From Topology)T: Nucleic acid-binding proteinsF: Ribosom_S12_S23ECOD (1.6)
L [auth AL]Ribosom_S12_S23e4v5sAL1 A: beta barrelsX: OB-foldH: Nucleic acid-binding proteins (From Topology)T: Nucleic acid-binding proteinsF: Ribosom_S12_S23ECOD (1.6)
RB [auth CK]Ribosomal_S11e4v5sCK1 A: mixed a+b and a/bX: Ribonuclease H-likeH: Ribonuclease H-like (From Topology)T: Ribonuclease H-likeF: Ribosomal_S11ECOD (1.6)
K [auth AK]Ribosomal_S11e4v5sAK1 A: mixed a+b and a/bX: Ribonuclease H-likeH: Ribonuclease H-like (From Topology)T: Ribonuclease H-likeF: Ribosomal_S11ECOD (1.6)
QB [auth CJ]Ribosomal_S10e4v5sCJ1 A: a+b two layersX: Alpha-beta plaitsH: Ribosomal protein S10 (From Topology)T: Ribosomal protein S10F: Ribosomal_S10ECOD (1.6)
J [auth AJ]Ribosomal_S10e4v5sAJ1 A: a+b two layersX: Alpha-beta plaitsH: Ribosomal protein S10 (From Topology)T: Ribosomal protein S10F: Ribosomal_S10ECOD (1.6)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
I [auth AI],
PB [auth CI]		PF00380Ribosomal protein S9/S16 (Ribosomal_S9)Ribosomal protein S9/S16- Family
H [auth AH],
OB [auth CH]		PF00410Ribosomal protein S8 (Ribosomal_S8)Ribosomal protein S8Domain
F [auth AF],
MB [auth CF]		PF01250Ribosomal protein S6 (Ribosomal_S6)Ribosomal protein S6Domain
GB [auth BZ],
ND [auth DZ]		PF14693Ribosomal protein TL5, C-terminal domain (Ribosomal_TL5_C)Ribosomal protein TL5, C-terminal domainThis family contains the C-terminal domain of ribosomal protein TL5. The N-terminal domain, which binds to 5S rRNA, is contained in family Ribosomal_L25p, Pfam:PF01386. Full length (N- and C-terminal domain) homologues of TL5 are also known as CTC pr ...This family contains the C-terminal domain of ribosomal protein TL5. The N-terminal domain, which binds to 5S rRNA, is contained in family Ribosomal_L25p, Pfam:PF01386. Full length (N- and C-terminal domain) homologues of TL5 are also known as CTC proteins. TL5 or CTC are not found in Eukarya or Archaea. In some Bacteria, including E. coli, this ribosomal subunit occurs as a single domain protein (named Ribosomal subunit L25), where the only domain is homologous to TL5 N-terminal domain (hence included in family Pfam:PF01386). The function of the C-terminal domain of TLC is at present unknown.
Domain
GB [auth BZ],
ND [auth DZ]		PF01386Ribosomal L25p family (Ribosomal_L25p)Ribosomal L25p familyRibosomal protein L25 is an RNA binding protein, that binds 5S rRNA. This family includes Ctc from B. subtilis Swiss:P14194, which is induced by stress. Domain
FB [auth BY],
MD [auth DY]		PF17136Large ribosomal subunit protein uL24, C-terminal domain (ribosomal_L24)Large ribosomal subunit protein uL24, C-terminal domainThis entry describes the C-terminal domain in large ribosomal subunit protein uL24 (also known as RPL26). RPL26 is one of the proteins from the large ribosomal subunit. In their mature form, these proteins have 103 to 150 amino-acid residues. RPL26 m ...This entry describes the C-terminal domain in large ribosomal subunit protein uL24 (also known as RPL26). RPL26 is one of the proteins from the large ribosomal subunit. In their mature form, these proteins have 103 to 150 amino-acid residues. RPL26 makes very minor contributions to the biogenesis structure, and function of 60s ribosomal subunits [1]. However, RPL24 is essential to generate the first intermediate during 50s ribosomal subunits assembly [2]. RPL26 have an extra-ribosomal function to enhances p53 translation after DNA damage [3].
Domain
FB [auth BY],
MD [auth DY]		PF00467KOW motif (KOW)KOW motif- Family
EB [auth BX],
LD [auth DX]		PF00276Ribosomal protein L23 (Ribosomal_L23)Ribosomal protein L23- Family
DB [auth BW],
KD [auth DW]		PF00237Ribosomal protein L22p/L17e (Ribosomal_L22)Ribosomal protein L22p/L17eThis family includes L22 from prokaryotes and chloroplasts and L17 from eukaryotes. Domain
CB [auth BV],
JD [auth DV]		PF00829Ribosomal prokaryotic L21 protein (Ribosomal_L21p)Ribosomal prokaryotic L21 protein- Family
BB [auth BU],
ID [auth DU]		PF00453Ribosomal protein L20 (Ribosomal_L20)Ribosomal protein L20- Family
AB [auth BT],
HD [auth DT]		PF01245Ribosomal protein L19 (Ribosomal_L19)Ribosomal protein L19- Family
FD [auth DR],
YA [auth BR]		PF01196Ribosomal protein L17 (Ribosomal_L17)Ribosomal protein L17- Family
E [auth AE],
LB [auth CE]		PF03719Ribosomal protein S5, C-terminal domain (Ribosomal_S5_C)Ribosomal protein S5, C-terminal domainDomain
E [auth AE],
LB [auth CE]		PF00333Ribosomal protein S5, N-terminal domain (Ribosomal_S5)Ribosomal protein S5, N-terminal domainDomain
ED [auth DQ],
XA [auth BQ]		PF00252Ribosomal protein L16p/L10e (Ribosomal_L16)Ribosomal protein L16p/L10eDomain
DD [auth DP],
WA [auth BP]		PF00828Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A (Ribosomal_L27A)Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27AThis family includes higher eukaryotic ribosomal 60S L27A, archaeal 50S L18e, prokaryotic 50S L15, fungal mitochondrial L10, plant L27A, mitochondrial L15 and chloroplast L18-3 proteins. Domain
CD [auth DO],
VA [auth BO]		PF00238Ribosomal protein L14p/L23e (Ribosomal_L14)Ribosomal protein L14p/L23eDomain
BD [auth DN],
UA [auth BN]		PF00572Ribosomal protein L13 (Ribosomal_L13)Ribosomal protein L13- Family
RA [auth BH],
YC [auth DH]		PF00347Ribosomal protein L6 (Ribosomal_L6)Ribosomal protein L6Domain
QA [auth BG],
XC [auth DG]		PF00281Ribosomal protein L5 (Ribosomal_L5)Ribosomal protein L5Domain
QA [auth BG],
XC [auth DG]		PF00673ribosomal L5P family C-terminus (Ribosomal_L5_C)ribosomal L5P family C-terminusThis region is found associated with Pfam:PF00281. Domain
PA [auth BF],
WC [auth DF]		PF00573Ribosomal protein L4/L1 family (Ribosomal_L4)Ribosomal protein L4/L1 family- Family
OA [auth BE],
VC [auth DE]		PF00297Ribosomal protein L3 (Ribosomal_L3)Ribosomal protein L3- Family
D [auth AD],
KB [auth CD]		PF00163Ribosomal protein S4/S9 N-terminal domain (Ribosomal_S4)Ribosomal protein S4/S9 N-terminal domain- Family
D [auth AD],
KB [auth CD]		PF01479S4 domain (S4)S4 domainThe S4 domain is a small domain consisting of 60-65 amino acid residues that was detected in the bacterial ribosomal protein S4, eukaryotic ribosomal S9, two families of pseudouridine synthases, a novel family of predicted RNA methylases, a yeast pro ...The S4 domain is a small domain consisting of 60-65 amino acid residues that was detected in the bacterial ribosomal protein S4, eukaryotic ribosomal S9, two families of pseudouridine synthases, a novel family of predicted RNA methylases, a yeast protein containing a pseudouridine synthetase and a deaminase domain, bacterial tyrosyl-tRNA synthetases, and a number of uncharacterized, small proteins that may be involved in translation regulation [1]. The S4 domain probably mediates binding to RNA.
Domain
NA [auth BD],
UC [auth DD]		PF03947Ribosomal Proteins L2, C-terminal domain (Ribosomal_L2_C)Ribosomal Proteins L2, C-terminal domainDomain
NA [auth BD],
UC [auth DD]		PF00181Ribosomal Proteins L2, RNA binding N-terminal domain (Ribosomal_L2_N)Ribosomal Proteins L2, RNA binding N-terminal domainDomain
MA [auth BC],
TC [auth DC]		PF00687Ribosomal protein L1p/L10e family (Ribosomal_L1)Ribosomal protein L1p/L10e familyThis family includes prokaryotic L1 and eukaryotic L10. Domain
JA [auth B9],
QC [auth D9]		PF00444Ribosomal protein L36 (Ribosomal_L36)Ribosomal protein L36Domain
IA [auth B8],
PC [auth D8]		PF01632Ribosomal protein L35 (Ribosomal_L35p)Ribosomal protein L35- Family
HA [auth B7],
OC [auth D7]		PF00468Ribosomal protein L34 (Ribosomal_L34)Ribosomal protein L34- Family
GA [auth B6],
NC [auth D6]		PF00471Ribosomal protein L33 (Ribosomal_L33)Ribosomal protein L33- Family
FA [auth B5],
MC [auth D5]		PF01783Ribosomal L32p protein family (Ribosomal_L32p)Ribosomal L32p protein family- Family
C [auth AC],
JB [auth CC]		PF07650KH domain (KH_2)KH domainDomain
C [auth AC],
JB [auth CC]		PF00189Ribosomal protein S3, C-terminal domain (Ribosomal_S3_C)Ribosomal protein S3, C-terminal domainThis family contains a central domain Pfam:PF00013, hence the amino and carboxyl terminal domains are stored separately. This is a minimal carboxyl-terminal domain. Some are much longer. Domain
DA [auth B3],
KC [auth D3]		PF00327Ribosomal protein L30p/L7e (Ribosomal_L30)Ribosomal protein L30p/L7eThis family includes prokaryotic L30 and eukaryotic L7. Domain
CA [auth B2],
JC [auth D2]		PF00831Ribosomal L29 protein (Ribosomal_L29)Ribosomal L29 protein- Family
BA [auth B1],
IC [auth D1]		PF00830Ribosomal L28 family (Ribosomal_L28)Ribosomal L28 family- Family
AA [auth B0],
HC [auth D0]		PF01016Ribosomal L27 protein (Ribosomal_L27)Ribosomal L27 protein- Family
GC [auth CZ],
Z [auth AZ]		PF00009Elongation factor Tu GTP binding domain (GTP_EFTU)Elongation factor Tu GTP binding domainThis domain contains a P-loop motif, also found in several other families such as Pfam:PF00071, Pfam:PF00025 and Pfam:PF00063. Elongation factor Tu consists of three structural domains, this plus two C-terminal beta barrel domains. Domain
GC [auth CZ],
Z [auth AZ]		PF03143Elongation factor Tu C-terminal domain (GTP_EFTU_D3)Elongation factor Tu C-terminal domainElongation factor Tu consists of three structural domains, this is the third domain. This domain adopts a beta barrel structure. This the third domain is involved in binding to both charged tRNA [1] and binding to EF-Ts Pfam:PF00889 [2]. Domain
GC [auth CZ],
Z [auth AZ]		PF03144Elongation factor Tu domain 2 (GTP_EFTU_D2)Elongation factor Tu domain 2Elongation factor Tu consists of three structural domains, this is the second domain. This domain adopts a beta barrel structure. This the second domain is involved in binding to charged tRNA [1]. This domain is also found in other proteins such as e ...Elongation factor Tu consists of three structural domains, this is the second domain. This domain adopts a beta barrel structure. This the second domain is involved in binding to charged tRNA [1]. This domain is also found in other proteins such as elongation factor G and translation initiation factor IF-2. This domain is structurally related to Pfam:PF03143, and in fact has weak sequence matches to this domain.
Domain
B [auth AB],
IB [auth CB]		PF00318Ribosomal protein S2 (Ribosomal_S2)Ribosomal protein S2- Family
R [auth AR],
YB [auth CR]		PF01084Ribosomal protein S18 (Ribosomal_S18)Ribosomal protein S18- Family
Q [auth AQ],
XB [auth CQ]		PF00366Ribosomal protein S17 (Ribosomal_S17)Ribosomal protein S17Domain
P [auth AP],
WB [auth CP]		PF00886Ribosomal protein S16 (Ribosomal_S16)Ribosomal protein S16- Family
O [auth AO],
VB [auth CO]		PF00312Ribosomal protein S15 (Ribosomal_S15)Ribosomal protein S15Domain
N [auth AN],
UB [auth CN]		PF00253Ribosomal protein S14p/S29e (Ribosomal_S14)Ribosomal protein S14p/S29e- Family
M [auth AM],
TB [auth CM]		PF00416Ribosomal protein S13/S18 (Ribosomal_S13)Ribosomal protein S13/S18- Family
L [auth AL],
SB [auth CL]		PF00164Ribosomal protein S12/S23 (Ribosom_S12_S23)Ribosomal protein S12/S23This protein is known as S12 in bacteria and archaea and S23 in eukaryotes. Domain
K [auth AK],
RB [auth CK]		PF00411Ribosomal protein S11 (Ribosomal_S11)Ribosomal protein S11- Family
J [auth AJ],
QB [auth CJ]		PF00338Ribosomal protein S10p/S20e (Ribosomal_S10)Ribosomal protein S10p/S20eThis family includes small ribosomal subunit S10 from prokaryotes and S20 from eukaryotes. Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
I [auth AI],
PB [auth CI]		30S RIBOSOMAL PROTEIN S9
H [auth AH],
OB [auth CH]		30S RIBOSOMAL PROTEIN S8
G [auth AG],
NB [auth CG]		30S RIBOSOMAL PROTEIN S7
F [auth AF],
MB [auth CF]		30S RIBOSOMAL PROTEIN S6
GB [auth BZ],
ND [auth DZ]		50S RIBOSOMAL PROTEIN L25
FB [auth BY],
MD [auth DY]		50S RIBOSOMAL PROTEIN L24
EB [auth BX],
LD [auth DX]		50S RIBOSOMAL PROTEIN L23
DB [auth BW],
KD [auth DW]		50S RIBOSOMAL PROTEIN L22
CB [auth BV],
JD [auth DV]		50S RIBOSOMAL PROTEIN L21
BB [auth BU],
ID [auth DU]		50S RIBOSOMAL PROTEIN L20
AB [auth BT],
HD [auth DT]		50S RIBOSOMAL PROTEIN L19
GD [auth DS],
ZA [auth BS]		50S RIBOSOMAL PROTEIN L18
FD [auth DR],
YA [auth BR]		50S RIBOSOMAL PROTEIN L17
E [auth AE],
LB [auth CE]		30S RIBOSOMAL PROTEIN S5
ED [auth DQ],
XA [auth BQ]		50S RIBOSOMAL PROTEIN L16
DD [auth DP],
WA [auth BP]		50S RIBOSOMAL PROTEIN L15
CD [auth DO],
VA [auth BO]		50S RIBOSOMAL PROTEIN L14
BD [auth DN],
UA [auth BN]		50S RIBOSOMAL PROTEIN L13
AD [auth DK],
TA [auth BK]		50S RIBOSOMAL PROTEIN L11---
SA [auth BJ],
ZC [auth DJ]		50S RIBOSOMAL PROTEIN L10---
RA [auth BH],
YC [auth DH]		50S RIBOSOMAL PROTEIN L6
QA [auth BG],
XC [auth DG]		50S RIBOSOMAL PROTEIN L5
PA [auth BF],
WC [auth DF]		50S RIBOSOMAL PROTEIN L4
OA [auth BE],
VC [auth DE]		50S RIBOSOMAL PROTEIN L3
D [auth AD],
KB [auth CD]		30S RIBOSOMAL PROTEIN S4
NA [auth BD],
UC [auth DD]		50S RIBOSOMAL PROTEIN L2
MA [auth BC],
TC [auth DC]		50S RIBOSOMAL PROTEIN L1
LA [auth BB],
SC [auth DB]		5S RIBOSOMAL RNA---
KA [auth BA],
RC [auth DA]		23S RIBOSOMAL RNA---
JA [auth B9],
QC [auth D9]		50S RIBOSOMAL PROTEIN L36
IA [auth B8],
PC [auth D8]		50S RIBOSOMAL PROTEIN L35
HA [auth B7],
OC [auth D7]		50S RIBOSOMAL PROTEIN L34
GA [auth B6],
NC [auth D6]		50S RIBOSOMAL PROTEIN L33
FA [auth B5],
MC [auth D5]		50S RIBOSOMAL PROTEIN L32
EA [auth B4],
LC [auth D4]		50S RIBOSOMAL PROTEIN L31
C [auth AC],
JB [auth CC]		30S RIBOSOMAL PROTEIN S3
DA [auth B3],
KC [auth D3]		50S RIBOSOMAL PROTEIN L30
CA [auth B2],
JC [auth D2]		50S RIBOSOMAL PROTEIN L29
BA [auth B1],
IC [auth D1]		50S RIBOSOMAL PROTEIN L28
AA [auth B0],
HC [auth D0]		50S RIBOSOMAL PROTEIN L27
GC [auth CZ],
Z [auth AZ]		ELONGATION FACTOR TU -
FC [auth CY],
Y [auth AY]		A-SITE TRNA G24A TRP-TRNA TRP---
EC [auth CX],
X [auth AX]		MRNA---
CC [auth CV],
DC [auth CW],
V [auth AV],
W [auth AW]		E-SITE TRNA PHE OR P-SITE TRNA PHE---
BC [auth CU],
U [auth AU]		30S RIBOSOMAL PROTEIN THX -
AC [auth CT],
T [auth AT]		30S RIBOSOMAL PROTEIN S20
B [auth AB],
IB [auth CB]		30S RIBOSOMAL PROTEIN S2
S [auth AS],
ZB [auth CS]		30S RIBOSOMAL PROTEIN S19
R [auth AR],
YB [auth CR]		30S RIBOSOMAL PROTEIN S18
Q [auth AQ],
XB [auth CQ]		30S RIBOSOMAL PROTEIN S17
P [auth AP],
WB [auth CP]		30S RIBOSOMAL PROTEIN S16
O [auth AO],
VB [auth CO]		30S RIBOSOMAL PROTEIN S15
N [auth AN],
UB [auth CN]		30S RIBOSOMAL PROTEIN S14
M [auth AM],
TB [auth CM]		30S RIBOSOMAL PROTEIN S13
L [auth AL],
SB [auth CL]		30S RIBOSOMAL PROTEIN S12
K [auth AK],
RB [auth CK]		30S RIBOSOMAL PROTEIN S11
J [auth AJ],
QB [auth CJ]		30S RIBOSOMAL PROTEIN S10
A [auth AA],
HB [auth CA]		16S RRNA---

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
I [auth AI],
PB [auth CI]		IPR020574Small ribosomal subunit protein uS9, conserved siteConserved Site
I [auth AI],
PB [auth CI]		IPR023035Small ribosomal subunit protein uS9, bacteria/plastidFamily
I [auth AI],
PB [auth CI]		IPR020568Ribosomal protein uS5 domain 2-type superfamilyHomologous Superfamily
I [auth AI],
PB [auth CI]		IPR000754Small ribosomal subunit protein uS9Family
I [auth AI],
PB [auth CI]		IPR014721Small ribosomal subunit protein uS5 domain 2-type fold, subgroupHomologous Superfamily
H [auth AH],
OB [auth CH]		IPR000630Small ribosomal subunit protein uS8Family
H [auth AH],
OB [auth CH]		IPR047863Small ribosomal subunit protein uS8, conserved siteConserved Site
H [auth AH],
OB [auth CH]		IPR035987Small ribosomal subunit protein uS8 superfamilyHomologous Superfamily
G [auth AG],
NB [auth CG]		IPR020606Small ribosomal subunit protein uS7, conserved siteConserved Site
G [auth AG],
NB [auth CG]		IPR000235Small ribosomal subunit protein uS7Family
G [auth AG],
NB [auth CG]		IPR005717Small ribosomal subunit protein uS7, bacteria/organellaFamily
G [auth AG],
NB [auth CG]		IPR036823Small ribosomal subunit protein uS7 domain superfamilyHomologous Superfamily
G [auth AG],
NB [auth CG]		IPR023798Small ribosomal subunit protein uS7 domainDomain
F [auth AF],
MB [auth CF]		IPR020815Small ribosomal subunit protein bS6, conserved siteConserved Site
F [auth AF],
MB [auth CF]		IPR000529Small ribosomal subunit protein bS6Family
F [auth AF],
MB [auth CF]		IPR020814Small ribosomal subunit protein bS6, plastid/chloroplastFamily
F [auth AF],
MB [auth CF]		IPR035980Small ribosomal subunit protein bS6 superfamilyHomologous Superfamily
F [auth AF],
MB [auth CF]		IPR014717Translation elongation factor EF1B/small ribosomal subunit protein bS6Homologous Superfamily
GB [auth BZ],
ND [auth DZ]		IPR011035Large ribosomal subunit protein bL25/Gln-tRNA synthetase, anti-codon-binding domain superfamilyHomologous Superfamily
GB [auth BZ],
ND [auth DZ]		IPR001021Ribosomal protein bL25, long-formFamily
GB [auth BZ],
ND [auth DZ]		IPR029751Large ribosomal subunit protein bL25, L25 domainDomain
GB [auth BZ],
ND [auth DZ]		IPR037121Large ribosomal subunit protein bL25, C-terminalHomologous Superfamily
GB [auth BZ],
ND [auth DZ]		IPR020057Large ribosomal subunit protein bL25, beta domainDomain
GB [auth BZ],
ND [auth DZ]		IPR020056Large ribosomal subunit protein bL25/Gln-tRNA synthetase, N-terminalHomologous Superfamily
GB [auth BZ],
ND [auth DZ]		IPR020930Large ribosomal subunit protein uL5, bacteriaFamily
FB [auth BY],
MD [auth DY]		IPR003256Large ribosomal subunit protein uL24Family
FB [auth BY],
MD [auth DY]		IPR041988Large ribosomal subunit protein uL24, KOW domainDomain
FB [auth BY],
MD [auth DY]		IPR014722Large ribosomal subunit protein uL2, domain 2Homologous Superfamily
FB [auth BY],
MD [auth DY]		IPR005824KOWDomain
FB [auth BY],
MD [auth DY]		IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
FB [auth BY],
MD [auth DY]		IPR005825Large ribosomal subunit protein uL24, conserved siteConserved Site
EB [auth BX],
LD [auth DX]		IPR012678Ribosomal protein uL23/eL15/eS24 core domain superfamilyHomologous Superfamily
EB [auth BX],
LD [auth DX]		IPR012677Nucleotide-binding alpha-beta plait domain superfamilyHomologous Superfamily
EB [auth BX],
LD [auth DX]		IPR013025Large ribosomal subunit protein uL23-likeFamily
DB [auth BW],
KD [auth DW]		IPR018260Large ribosomal subunit protein uL22, conserved siteConserved Site
DB [auth BW],
KD [auth DW]		IPR036394Ribosomal protein uL22 superfamilyHomologous Superfamily
DB [auth BW],
KD [auth DW]		IPR001063Large ribosomal subunit protein uL22Family
DB [auth BW],
KD [auth DW]		IPR005727Large ribosomal subunit protein uL22, bacterial/chloroplast-typeFamily
DB [auth BW],
KD [auth DW]		IPR047867Large ribosomal subunit protein uL22, bacteria/organellaFamily
CB [auth BV],
JD [auth DV]		IPR028909Large ribosomal subunit protein bL21-likeFamily
CB [auth BV],
JD [auth DV]		IPR001787Large ribosomal subunit protein bL21Family
CB [auth BV],
JD [auth DV]		IPR036164Large ribosomal subunit protein bL21-like superfamilyHomologous Superfamily
BB [auth BU],
ID [auth DU]		IPR049946Large ribosomal subunit protein bL20, conserved siteConserved Site
BB [auth BU],
ID [auth DU]		IPR035566Ribosomal protein bL20, C-terminalHomologous Superfamily
BB [auth BU],
ID [auth DU]		IPR005813Large ribosomal subunit protein bL20Family
AB [auth BT],
HD [auth DT]		IPR001857Large ribosomal subunit protein bL19Family
AB [auth BT],
HD [auth DT]		IPR038657Large ribosomal subunit protein bL19 superfamilyHomologous Superfamily
AB [auth BT],
HD [auth DT]		IPR018257Large ribosomal subunit protein bL19, conserved siteConserved Site
AB [auth BT],
HD [auth DT]		IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
GD [auth DS],
ZA [auth BS]		IPR005484Large ribosomal subunit protein uL18, bacterial/plantae/animaliaFamily
GD [auth DS],
ZA [auth BS]		IPR004389Large ribosomal subunit protein uL18, bacteriaFamily
FD [auth DR],
YA [auth BR]		IPR036373Large ribosomal subunit protein bL17 superfamilyHomologous Superfamily
FD [auth DR],
YA [auth BR]		IPR000456Large ribosomal subunit protein bL17Family
E [auth AE],
LB [auth CE]		IPR005712Small ribosomal subunit protein uS5, bacteriaFamily
E [auth AE],
LB [auth CE]		IPR000851Small ribosomal subunit protein uS5Family
E [auth AE],
LB [auth CE]		IPR005324Small ribosomal subunit protein uS5, C-terminalDomain
E [auth AE],
LB [auth CE]		IPR013810Small ribosomal subunit protein uS5, N-terminalDomain
E [auth AE],
LB [auth CE]		IPR020568Ribosomal protein uS5 domain 2-type superfamilyHomologous Superfamily
E [auth AE],
LB [auth CE]		IPR018192Small ribosomal subunit protein uS5, N-terminal, conserved siteConserved Site
E [auth AE],
LB [auth CE]		IPR014721Small ribosomal subunit protein uS5 domain 2-type fold, subgroupHomologous Superfamily
ED [auth DQ],
XA [auth BQ]		IPR000114Large ribosomal subunit protein uL16, bacteriaFamily
ED [auth DQ],
XA [auth BQ]		IPR036920Large ribosomal subunit protein uL16 superfamilyHomologous Superfamily
ED [auth DQ],
XA [auth BQ]		IPR016180Large ribosomal subunit protein uL16 domainDomain
ED [auth DQ],
XA [auth BQ]		IPR047873Large ribosomal subunit protein uL16Family
DD [auth DP],
WA [auth BP]		IPR021131Large ribosomal subunit protein uL15/eL18Domain
DD [auth DP],
WA [auth BP]		IPR030878Large ribosomal subunit protein uL15Family
DD [auth DP],
WA [auth BP]		IPR001196Large ribosomal subunit protein uL15, conserved siteConserved Site
DD [auth DP],
WA [auth BP]		IPR036227Large ribosomal subunit protein uL15/eL18 superfamilyHomologous Superfamily
DD [auth DP],
WA [auth BP]		IPR005749Large ribosomal subunit protein uL15, bacteriaFamily
CD [auth DO],
VA [auth BO]		IPR036853Large ribosomal subunit protein uL14 superfamilyHomologous Superfamily
CD [auth DO],
VA [auth BO]		IPR000218Large ribosomal subunit protein uL14Family
CD [auth DO],
VA [auth BO]		IPR019972Large ribosomal subunit protein uL14, conserved siteConserved Site
CD [auth DO],
VA [auth BO]		IPR005745Large ribosomal subunit protein uL14, bacteriaFamily
BD [auth DN],
UA [auth BN]		IPR023563Large ribosomal subunit protein uL13, conserved siteConserved Site
BD [auth DN],
UA [auth BN]		IPR005822Large ribosomal subunit protein uL13Family
BD [auth DN],
UA [auth BN]		IPR005823Large ribosomal subunit protein uL13, bacteriaFamily
BD [auth DN],
UA [auth BN]		IPR036899Large ribosomal subunit protein uL13 superfamilyHomologous Superfamily
RA [auth BH],
YC [auth DH]		IPR020040Large ribosomal subunit protein uL6, alpha-beta domainDomain
RA [auth BH],
YC [auth DH]		IPR036789Large ribosomal subunit protein uL6-like, alpha-beta domain superfamilyHomologous Superfamily
RA [auth BH],
YC [auth DH]		IPR000702Large ribosomal subunit protein uL6-likeFamily
RA [auth BH],
YC [auth DH]		IPR019906Large ribosomal subunit protein uL6, bacteriaFamily
QA [auth BG],
XC [auth DG]		IPR020929Large ribosomal subunit protein uL5, conserved siteConserved Site
QA [auth BG],
XC [auth DG]		IPR022803Large ribosomal subunit protein uL5 domain superfamilyHomologous Superfamily
QA [auth BG],
XC [auth DG]		IPR031309Large ribosomal subunit protein uL5, C-terminalDomain
QA [auth BG],
XC [auth DG]		IPR031310Large ribosomal subunit protein uL5, N-terminalDomain
QA [auth BG],
XC [auth DG]		IPR002132Large ribosomal subunit protein uL5Family
QA [auth BG],
XC [auth DG]		IPR020930Large ribosomal subunit protein uL5, bacteriaFamily
PA [auth BF],
WC [auth DF]		IPR013005Large ribosomal subunit protein uL4-likeFamily
PA [auth BF],
WC [auth DF]		IPR002136Large ribosomal subunit protein uL4Family
PA [auth BF],
WC [auth DF]		IPR023574Large ribosomal subunit protein uL4 domain superfamilyHomologous Superfamily
OA [auth BE],
VC [auth DE]		IPR019926Large ribosomal subunit protein uL3, conserved siteConserved Site
OA [auth BE],
VC [auth DE]		IPR019927Large ribosomal subunit protein uL3, bacteria/organellaFamily
OA [auth BE],
VC [auth DE]		IPR009000Translation protein, beta-barrel domain superfamilyHomologous Superfamily
OA [auth BE],
VC [auth DE]		IPR000597Large ribosomal subunit protein uL3Family
D [auth AD],
KB [auth CD]		IPR018079Small ribosomal subunit protein uS4, conserved siteConserved Site
D [auth AD],
KB [auth CD]		IPR002942RNA-binding S4 domainDomain
D [auth AD],
KB [auth CD]		IPR001912Small ribosomal subunit protein uS4, N-terminalDomain
D [auth AD],
KB [auth CD]		IPR036986RNA-binding S4 domain superfamilyHomologous Superfamily
D [auth AD],
KB [auth CD]		IPR022801Small ribosomal subunit protein uS4Family
D [auth AD],
KB [auth CD]		IPR005709Small ribosomal subunit protein uS4, bacteriaFamily
NA [auth BD],
UC [auth DD]		IPR005880Large ribosomal subunit protein uL2, bacteria/organellaFamily
NA [auth BD],
UC [auth DD]		IPR022669Large ribosomal subunit protein uL2, C-terminalDomain
NA [auth BD],
UC [auth DD]		IPR014722Large ribosomal subunit protein uL2, domain 2Homologous Superfamily
NA [auth BD],
UC [auth DD]		IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
NA [auth BD],
UC [auth DD]		IPR022671Large ribosomal subunit protein uL2, conserved siteConserved Site
NA [auth BD],
UC [auth DD]		IPR012340Nucleic acid-binding, OB-foldHomologous Superfamily
NA [auth BD],
UC [auth DD]		IPR022666Large ribosomal subunit protein uL2, RNA-binding domainDomain
NA [auth BD],
UC [auth DD]		IPR014726Large ribosomal subunit protein uL2, domain 3Homologous Superfamily
NA [auth BD],
UC [auth DD]		IPR002171Large ribosomal subunit protein uL2Family
MA [auth BC],
TC [auth DC]		IPR023673Large ribosomal subunit protein uL1, conserved siteConserved Site
MA [auth BC],
TC [auth DC]		IPR005878Large ribosomal subunit protein uL1, bacteriaFamily
MA [auth BC],
TC [auth DC]		IPR016095Large ribosomal subunit protein uL1, 3-layer alpha/beta-sandwich domainHomologous Superfamily
MA [auth BC],
TC [auth DC]		IPR023674Ribosomal protein uL1-likeHomologous Superfamily
MA [auth BC],
TC [auth DC]		IPR002143Large ribosomal subunit protein uL1Family
MA [auth BC],
TC [auth DC]		IPR028364Ribosomal protein uL1/ribosomal biogenesis proteinFamily
JA [auth B9],
QC [auth D9]		IPR000473Large ribosomal subunit protein bL36Family
JA [auth B9],
QC [auth D9]		IPR035977Large ribosomal subunit protein bL36 superfamilyHomologous Superfamily
IA [auth B8],
PC [auth D8]		IPR021137Large ribosomal subunit protein bL35-likeFamily
IA [auth B8],
PC [auth D8]		IPR018265Large ribosomal subunit protein bL35, conserved siteConserved Site
IA [auth B8],
PC [auth D8]		IPR001706Large ribosomal subunit protein bL35Family
IA [auth B8],
PC [auth D8]		IPR037229Large ribosomal subunit protein bL35 superfamilyHomologous Superfamily
HA [auth B7],
OC [auth D7]		IPR020939Large ribosomal subunit protein bL34, conserved siteConserved Site
HA [auth B7],
OC [auth D7]		IPR000271Large ribosomal subunit protein bL34Family
GA [auth B6],
NC [auth D6]		IPR011332Zinc-binding ribosomal proteinHomologous Superfamily
GA [auth B6],
NC [auth D6]		IPR038584Large ribosomal subunit protein bL33 superfamilyHomologous Superfamily
GA [auth B6],
NC [auth D6]		IPR001705Large ribosomal subunit protein bL33Family
GA [auth B6],
NC [auth D6]		IPR018264Large ribosomal subunit protein bL33, conserved siteConserved Site
FA [auth B5],
MC [auth D5]		IPR002677Large ribosomal subunit protein bL32Family
FA [auth B5],
MC [auth D5]		IPR011332Zinc-binding ribosomal proteinHomologous Superfamily
FA [auth B5],
MC [auth D5]		IPR044957Large ribosomal subunit protein bL32, bacteriaFamily
EA [auth B4],
LC [auth D4]		IPR002150Large ribosomal subunit protein bL31 type A/BFamily
EA [auth B4],
LC [auth D4]		IPR027491Large ribosomal subunit protein bL31 type AFamily
EA [auth B4],
LC [auth D4]		IPR042105Large ribosomal subunit protein bL31 superfamilyHomologous Superfamily
EA [auth B4],
LC [auth D4]		IPR034704Large ribosomal subunit protein bL28/bL31-like superfamilyHomologous Superfamily
C [auth AC],
JB [auth CC]		IPR005704Small ribosomal subunit protein uS3, bacteriaFamily
C [auth AC],
JB [auth CC]		IPR001351Small ribosomal subunit protein uS3, C-terminalDomain
C [auth AC],
JB [auth CC]		IPR009019K homology domain superfamily, prokaryotic typeHomologous Superfamily
C [auth AC],
JB [auth CC]		IPR004087K Homology domainDomain
C [auth AC],
JB [auth CC]		IPR004044K Homology domain, type 2Domain
C [auth AC],
JB [auth CC]		IPR015946K homology domain-like, alpha/betaHomologous Superfamily
C [auth AC],
JB [auth CC]		IPR036419Ribosomal protein S3, C-terminal domain superfamilyHomologous Superfamily
C [auth AC],
JB [auth CC]		IPR018280Small ribosomal subunit protein uS3, conserved siteConserved Site
DA [auth B3],
KC [auth D3]		IPR036919Large ribosomal subunit protein uL30, ferredoxin-like fold domain superfamilyHomologous Superfamily
DA [auth B3],
KC [auth D3]		IPR005996Large ribosomal subunit protein uL30, bacteriaFamily
DA [auth B3],
KC [auth D3]		IPR016082Large ribosomal subunit protein uL30-like, ferredoxin-like fold domainDomain
DA [auth B3],
KC [auth D3]		IPR018038Large ribosomal subunit protein uL30, conserved siteConserved Site
CA [auth B2],
JC [auth D2]		IPR050063Universal ribosomal protein uL29Family
CA [auth B2],
JC [auth D2]		IPR001854Large ribosomal subunit protein uL29Family
CA [auth B2],
JC [auth D2]		IPR036049Large ribosomal subunit protein uL29 superfamilyHomologous Superfamily
CA [auth B2],
JC [auth D2]		IPR018254Large ribosomal subunit protein uL29, conserved siteConserved Site
BA [auth B1],
IC [auth D1]		IPR050096Bacterial ribosomal protein bL28Family
BA [auth B1],
IC [auth D1]		IPR001383Large ribosomal subunit protein bL28, bacteriaFamily
BA [auth B1],
IC [auth D1]		IPR026569Large ribosomal subunit protein bL28Family
BA [auth B1],
IC [auth D1]		IPR034704Large ribosomal subunit protein bL28/bL31-like superfamilyHomologous Superfamily
AA [auth B0],
HC [auth D0]		IPR001684Large ribosomal subunit protein bL27Family
AA [auth B0],
HC [auth D0]		IPR018261Large ribosomal subunit protein bL27, conserved siteConserved Site
GC [auth CZ],
Z [auth AZ]		IPR005225Small GTP-binding domainDomain
GC [auth CZ],
Z [auth AZ]		IPR000795Translational (tr)-type GTP-binding domainDomain
GC [auth CZ],
Z [auth AZ]		IPR033720Elongation factor Tu, domain 2Domain
GC [auth CZ],
Z [auth AZ]		IPR009001Translation elongation factor EF1A/initiation factor IF2gamma, C-terminalHomologous Superfamily
GC [auth CZ],
Z [auth AZ]		IPR031157Tr-type G domain, conserved siteConserved Site
GC [auth CZ],
Z [auth AZ]		IPR004541Translation elongation factor EFTu/EF1A, bacterial/organelleFamily
GC [auth CZ],
Z [auth AZ]		IPR004161Translation elongation factor EFTu-like, domain 2Domain
GC [auth CZ],
Z [auth AZ]		IPR009000Translation protein, beta-barrel domain superfamilyHomologous Superfamily
GC [auth CZ],
Z [auth AZ]		IPR004160Translation elongation factor EFTu/EF1A, C-terminalDomain
GC [auth CZ],
Z [auth AZ]		IPR050055Elongation factor Tu GTPaseFamily
GC [auth CZ],
Z [auth AZ]		IPR041709Elongation factor Tu (EF-Tu), GTP-binding domainDomain
GC [auth CZ],
Z [auth AZ]		IPR027417P-loop containing nucleoside triphosphate hydrolaseHomologous Superfamily
BC [auth CU],
U [auth AU]		IPR030826Small ribosomal subunit protein bTHX/bTHXc/bTHXmFamily
BC [auth CU],
U [auth AU]		IPR031414Small ribosomal subunit protein bTHXFamily
AC [auth CT],
T [auth AT]		IPR036510Small ribosomal subunit protein bS20 superfamilyHomologous Superfamily
AC [auth CT],
T [auth AT]		IPR002583Small ribosomal subunit protein bS20Family
B [auth AB],
IB [auth CB]		IPR005706Small ribosomal subunit protein uS2, bacteria/mitochondria/plastidFamily
B [auth AB],
IB [auth CB]		IPR023591Small ribosomal subunit protein uS2, flavodoxin-like domain superfamilyHomologous Superfamily
B [auth AB],
IB [auth CB]		IPR018130Small ribosomal subunit protein uS2, conserved siteConserved Site
B [auth AB],
IB [auth CB]		IPR001865Small ribosomal subunit protein uS2Family
S [auth AS],
ZB [auth CS]		IPR005732Small ribosomal subunit protein uS19, bacteriaFamily
S [auth AS],
ZB [auth CS]		IPR002222Small ribosomal subunit protein uS19Family
S [auth AS],
ZB [auth CS]		IPR023575Small ribosomal subunit protein uS19, superfamilyHomologous Superfamily
S [auth AS],
ZB [auth CS]		IPR020934Small ribosomal subunit protein uS19, conserved siteConserved Site
R [auth AR],
YB [auth CR]		IPR001648Small ribosomal subunit protein bS18Family
R [auth AR],
YB [auth CR]		IPR018275Small ribosomal subunit protein bS18, conserved siteConserved Site
R [auth AR],
YB [auth CR]		IPR036870Small ribosomal subunit protein bS18 superfamilyHomologous Superfamily
Q [auth AQ],
XB [auth CQ]		IPR019984Small ribosomal subunit protein uS17, bacteria/chloroplastFamily
Q [auth AQ],
XB [auth CQ]		IPR019979Small ribosomal subunit protein uS17, conserved siteConserved Site
Q [auth AQ],
XB [auth CQ]		IPR012340Nucleic acid-binding, OB-foldHomologous Superfamily
Q [auth AQ],
XB [auth CQ]		IPR000266Small ribosomal subunit protein uS17Family
P [auth AP],
WB [auth CP]		IPR023803Small ribosomal subunit protein bS16 domain superfamilyHomologous Superfamily
P [auth AP],
WB [auth CP]		IPR000307Small ribosomal subunit protein bS16Family
O [auth AO],
VB [auth CO]		IPR005290Small ribosomal subunit protein uS15, bacteriaFamily
O [auth AO],
VB [auth CO]		IPR009068uS15/NS1, RNA-binding domain superfamilyHomologous Superfamily
O [auth AO],
VB [auth CO]		IPR000589Small ribosomal subunit protein uS15Family
N [auth AN],
UB [auth CN]		IPR023053Small ribosomal subunit protein uS14, bacteriaFamily
N [auth AN],
UB [auth CN]		IPR001209Small ribosomal subunit protein uS14Family
N [auth AN],
UB [auth CN]		IPR018271Small ribosomal subunit protein uS14, conserved siteConserved Site
N [auth AN],
UB [auth CN]		IPR043140Small ribosomal subunit protein uS14 superfamilyHomologous Superfamily
M [auth AM],
TB [auth CM]		IPR027437Small ribosomal subunit protein uS13, C-terminalHomologous Superfamily
M [auth AM],
TB [auth CM]		IPR001892Small ribosomal subunit protein uS13Family
M [auth AM],
TB [auth CM]		IPR018269Small ribosomal subunit protein uS13, conserved siteConserved Site
M [auth AM],
TB [auth CM]		IPR010979Small ribosomal subunit protein uS13-like, H2THHomologous Superfamily
M [auth AM],
TB [auth CM]		IPR019980Small ribosomal subunit protein uS13, bacteriaFamily
L [auth AL],
SB [auth CL]		IPR006032Small ribosomal subunit protein uS12Family
L [auth AL],
SB [auth CL]		IPR005679Ribosomal protein uS12, bacteriaFamily
L [auth AL],
SB [auth CL]		IPR012340Nucleic acid-binding, OB-foldHomologous Superfamily
K [auth AK],
RB [auth CK]		IPR001971Small ribosomal subunit protein uS11Family
K [auth AK],
RB [auth CK]		IPR036967Small ribosomal subunit protein uS11 superfamilyHomologous Superfamily
K [auth AK],
RB [auth CK]		IPR019981Small ribosomal subunit protein uS11, bacteriaFamily
K [auth AK],
RB [auth CK]		IPR018102Small ribosomal subunit protein uS11, conserved siteConserved Site
J [auth AJ],
QB [auth CJ]		IPR001848Small ribosomal subunit protein uS10Family
J [auth AJ],
QB [auth CJ]		IPR027486Small ribosomal subunit protein uS10 domainDomain
J [auth AJ],
QB [auth CJ]		IPR036838Small ribosomal subunit protein uS10 domain superfamilyHomologous Superfamily
J [auth AJ],
QB [auth CJ]		IPR018268Small ribosomal subunit protein uS10, conserved siteConserved Site