6GLW | pdb_00006glw

Structure of galectin-10 in complex with the Fab fragment of a Charcot-Leyden crystal solubilizing antibody, 1D11


Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

ChainsDomain InfoClassFoldSuperfamilyFamilyDomainSpeciesProvenance Source (Version)
F [auth L]d6glwl2 All beta proteins Immunoglobulin-like beta-sandwich Immunoglobulin C1 set domains (antibody constant domain-like) automated matches llama (Lama glama ) [TaxId: 9844 ], SCOPe (2.08)
F [auth L]d6glwl1 All beta proteins Immunoglobulin-like beta-sandwich Immunoglobulin automated matches automated matches llama (Lama glama ) [TaxId: 9844 ], SCOPe (2.08)
Dd6glwd2 All beta proteins Immunoglobulin-like beta-sandwich Immunoglobulin C1 set domains (antibody constant domain-like) automated matches llama (Lama glama ) [TaxId: 9844 ], SCOPe (2.08)
Dd6glwd1 All beta proteins Immunoglobulin-like beta-sandwich Immunoglobulin automated matches automated matches llama (Lama glama ) [TaxId: 9844 ], SCOPe (2.08)
E [auth H]d6glwh_ All beta proteins Immunoglobulin-like beta-sandwich Immunoglobulin V set domains (antibody variable domain-like) automated matches llama (Lama glama ) [TaxId: 9844 ], SCOPe (2.08)
Cd6glwc_ All beta proteins Immunoglobulin-like beta-sandwich Immunoglobulin V set domains (antibody variable domain-like) automated matches llama (Lama glama ) [TaxId: 9844 ], SCOPe (2.08)
Bd6glwb_ All beta proteins Concanavalin A-like lectins/glucanases Concanavalin A-like lectins/glucanases Galectin (animal S-lectin) automated matches Human (Homo sapiens ) [TaxId: 9606 ], SCOPe (2.08)
Ad6glwa_ All beta proteins Concanavalin A-like lectins/glucanases Concanavalin A-like lectins/glucanases Galectin (animal S-lectin) automated matches Human (Homo sapiens ) [TaxId: 9606 ], SCOPe (2.08)

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
BSCOP2B SuperfamilyConcanavalin A-like lectins/glucanases 8041404 3000120 SCOP2B (2022-06-29)
ASCOP2B SuperfamilyConcanavalin A-like lectins/glucanases 8041404 3000120 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
F [auth L]C1-sete6glwL2 A: beta sandwichesX: Immunoglobulin-like beta-sandwichH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: C1-setECOD (1.6)
F [auth L]V-set_3e6glwL1 A: beta sandwichesX: Immunoglobulin-like beta-sandwichH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: V-set_3ECOD (1.6)
DC1-sete6glwD1 A: beta sandwichesX: Immunoglobulin-like beta-sandwichH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: C1-setECOD (1.6)
DV-set_3e6glwD2 A: beta sandwichesX: Immunoglobulin-like beta-sandwichH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: V-set_3ECOD (1.6)
E [auth H]C1-set_1e6glwH2 A: beta sandwichesX: Immunoglobulin-like beta-sandwichH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: C1-set_1ECOD (1.6)
E [auth H]V-set_12e6glwH1 A: beta sandwichesX: Immunoglobulin-like beta-sandwichH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: V-set_12ECOD (1.6)
CC1-set_1e6glwC1 A: beta sandwichesX: Immunoglobulin-like beta-sandwichH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: C1-set_1ECOD (1.6)
CV-set_12e6glwC2 A: beta sandwichesX: Immunoglobulin-like beta-sandwichH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: V-set_12ECOD (1.6)
BGal-bind_lectine6glwB1 A: beta sandwichesX: jelly-rollH: Concanavalin A-likeT: Concanavalin A-like lectins/glucanasesF: Gal-bind_lectinECOD (1.6)
AGal-bind_lectine6glwA1 A: beta sandwichesX: jelly-rollH: Concanavalin A-likeT: Concanavalin A-like lectins/glucanasesF: Gal-bind_lectinECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
F [auth L]2.60.40.10 Mainly Beta Sandwich Immunoglobulin-like ImmunoglobulinsCATH (utative)
D2.60.40.10 Mainly Beta Sandwich Immunoglobulin-like ImmunoglobulinsCATH (utative)
E [auth H]2.60.40.10 Mainly Beta Sandwich Immunoglobulin-like ImmunoglobulinsCATH (utative)
C2.60.40.10 Mainly Beta Sandwich Immunoglobulin-like ImmunoglobulinsCATH (utative)
B2.60.120.200 Mainly Beta Sandwich Jelly Rolls CATH (utative)
A2.60.120.200 Mainly Beta Sandwich Jelly Rolls CATH (utative)

IMGT Antibody Annotation IMGT Database Homepage

ChainProtein NameDescriptionOrganism NameGene Allele Name(s)Domain Name(s)Receptor TypeReceptor DescriptionProvenance Source
D,
F [auth L]
Fab 4E8 L-LAMBDA Homo sapiens (human) IGLV2-8*01, IGLJ7*01, IGLC2*01, IGLC2*02, IGLC3*04 V-DOMAIN V-LAMBDA, C-DOMAIN C-LAMBDA IG FAB-GAMMA-1_LAMBDA IMGT (202539-0)
C,
E [auth H]
Fab 4E8 VH-CH1 Homo sapiens (human) IGHV3-23*04, IGHJ4*01, IGHJ4*02, IGHJ4*03, IGHG1*01, IGHG1*02, IGHG1*04, IGHG1*05, IGHG1*12, IGHG1*14, IGHG1*13, IGHG1*09, IGHG1*10, IGHG1*07, IGHG1*11 V-DOMAIN VH, C-DOMAIN CH1 IG FAB-GAMMA-1_LAMBDA IMGT (202539-0)

SAbDab Antibody Annotation SAbDab Database Homepage

ChainChain ClassChain SubclassChain TypeAntigen Name(s) Provenance Source
D,
F [auth L]
Light ChainIGLV2 Lambdagalectin-10SAbDab (2025-10-10)
C,
E [auth H]
Heavy ChainIGHV3 -galectin-10SAbDab (2025-10-10)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
A, B
PF00337Galactoside-binding lectin (Gal-bind_lectin)Galactoside-binding lectinThis family contains galactoside binding lectins. The family also includes enzymes such as human eosinophil lysophospholipase (Swiss:Q05315, EC:3.1.1.5). Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
D,
F [auth L]
Fab 1D11 - Light chain---
C,
E [auth H]
Fab 1D11 - Heavy chain---
A, B
Galectin-10