9SCW | pdb_00009scw

Crystal structure of Coxsackie B1 virus-like particle delta-palxa

External Resource: Annotation

Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
BA [auth P], D [auth 4], FA [auth T], H [auth D], JA [auth X], BA [auth P], D [auth 4], FA [auth T], H [auth D], JA [auth X], L [auth H], NA [auth f], P [auth b], T [auth j], X [auth L]	PF00073	picornavirus capsid protein (Rhv)	picornavirus capsid protein	CAUTION: This alignment is very weak. It can not be generated by clustalw. If a representative set is used for a seed, many so-called members are not recognised. The family should probably be split up into sub-families. Capsid proteins of picornavi ...	CAUTION: This alignment is very weak. It can not be generated by clustalw. If a representative set is used for a seed, many so-called members are not recognised. The family should probably be split up into sub-families. Capsid proteins of picornaviruses. Picornaviruses are non-enveloped plus-strand ssRNA animal viruses with icosahedral capsids. They include rhinovirus (common cold) and poliovirus. Common structure is an 8-stranded beta sandwich. Variations (one or two extra strands) occur.	Domain
AA [auth O], C [auth 3], CB [auth 6], EA [auth S], FB [auth AA], AA [auth O], C [auth 3], CB [auth 6], EA [auth S], FB [auth AA], G [auth C], IA [auth W], IB [auth AE], K [auth G], LB [auth AI], MA [auth e], O [auth a], OB [auth AM], QA [auth m], RB [auth AQ], S [auth i], TA [auth q], W [auth K], WA [auth u], ZA [auth y]	PF00073	picornavirus capsid protein (Rhv)	picornavirus capsid protein	CAUTION: This alignment is very weak. It can not be generated by clustalw. If a representative set is used for a seed, many so-called members are not recognised. The family should probably be split up into sub-families. Capsid proteins of picornavi ...	CAUTION: This alignment is very weak. It can not be generated by clustalw. If a representative set is used for a seed, many so-called members are not recognised. The family should probably be split up into sub-families. Capsid proteins of picornaviruses. Picornaviruses are non-enveloped plus-strand ssRNA animal viruses with icosahedral capsids. They include rhinovirus (common cold) and poliovirus. Common structure is an 8-stranded beta sandwich. Variations (one or two extra strands) occur.	Domain
B [auth 2], BB [auth 5], DA [auth R], EB [auth 9], F [auth B], B [auth 2], BB [auth 5], DA [auth R], EB [auth 9], F [auth B], HA [auth V], HB [auth AD], J [auth F], KB [auth AH], LA [auth d], N [auth Z], NB [auth AL], PA [auth l], QB [auth AP], R [auth h], SA [auth p], V [auth J], VA [auth t], YA [auth x], Z [auth N]	PF00073	picornavirus capsid protein (Rhv)	picornavirus capsid protein	CAUTION: This alignment is very weak. It can not be generated by clustalw. If a representative set is used for a seed, many so-called members are not recognised. The family should probably be split up into sub-families. Capsid proteins of picornavi ...	CAUTION: This alignment is very weak. It can not be generated by clustalw. If a representative set is used for a seed, many so-called members are not recognised. The family should probably be split up into sub-families. Capsid proteins of picornaviruses. Picornaviruses are non-enveloped plus-strand ssRNA animal viruses with icosahedral capsids. They include rhinovirus (common cold) and poliovirus. Common structure is an 8-stranded beta sandwich. Variations (one or two extra strands) occur.	Domain
A [auth 1], AB [auth 0], CA [auth Q], DB [auth 8], E [auth A], A [auth 1], AB [auth 0], CA [auth Q], DB [auth 8], E [auth A], GA [auth U], GB [auth AC], I [auth E], JB [auth AG], KA [auth c], M [auth Y], MB [auth AK], OA [auth k], PB [auth AO], Q [auth g], RA [auth o], U [auth I], UA [auth s], XA [auth w], Y [auth M]	PF00073	picornavirus capsid protein (Rhv)	picornavirus capsid protein	CAUTION: This alignment is very weak. It can not be generated by clustalw. If a representative set is used for a seed, many so-called members are not recognised. The family should probably be split up into sub-families. Capsid proteins of picornavi ...	CAUTION: This alignment is very weak. It can not be generated by clustalw. If a representative set is used for a seed, many so-called members are not recognised. The family should probably be split up into sub-families. Capsid proteins of picornaviruses. Picornaviruses are non-enveloped plus-strand ssRNA animal viruses with icosahedral capsids. They include rhinovirus (common cold) and poliovirus. Common structure is an 8-stranded beta sandwich. Variations (one or two extra strands) occur.	Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
BA [auth P], D [auth 4], FA [auth T], H [auth D], JA [auth X], BA [auth P], D [auth 4], FA [auth T], H [auth D], JA [auth X], L [auth H], NA [auth f], P [auth b], T [auth j], X [auth L]	Capsid protein VP4	cysteine-type peptidase activity peptidase activity catalytic activity, acting on a protein cysteine-type endopeptidase activity hydrolase activity catalytic activity endopeptidase activity RNA-directed RNA polymerase activity 5'-3' RNA polymerase activity catalytic activity, acting on RNA catalytic activity, acting on a nucleic acid RNA polymerase activity transferase activity nucleotidyltransferase activity cysteine-type peptidase activity peptidase activity catalytic activity, acting on a protein cysteine-type endopeptidase activity hydrolase activity catalytic activity endopeptidase activity RNA-directed RNA polymerase activity 5'-3' RNA polymerase activity catalytic activity, acting on RNA catalytic activity, acting on a nucleic acid RNA polymerase activity transferase activity nucleotidyltransferase activity transferase activity, transferring phosphorus-containing groups RNA binding binding nucleic acid binding adenyl ribonucleotide binding nucleotide binding purine ribonucleotide binding purine ribonucleoside triphosphate binding nucleoside phosphate binding ion binding purine nucleotide binding anion binding adenyl nucleotide binding ATP binding heterocyclic compound binding carbohydrate derivative binding ribonucleotide binding small molecule binding pyrophosphatase activity ATP hydrolysis activity ribonucleoside triphosphate phosphatase activity hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides hydrolase activity, acting on acid anhydrides ATP-dependent activity passive transmembrane transporter activity channel activity transporter activity transmembrane transporter activity nucleic acid conformation isomerase activity isomerase activity helicase activity RNA helicase activity ATP-dependent activity, acting on RNA macromolecular conformation isomerase activity structural molecule activity cation binding transition metal ion binding zinc ion binding metal ion binding	nucleobase-containing compound metabolic process DNA replication metabolic process cellular process primary metabolic process DNA metabolic process macromolecule metabolic process nucleic acid metabolic process RNA metabolic process viral life cycle nucleobase-containing compound biosynthetic process macromolecule biosynthetic process RNA biosynthetic process nucleic acid biosynthetic process nucleobase-containing compound metabolic process DNA replication metabolic process cellular process primary metabolic process DNA metabolic process macromolecule metabolic process nucleic acid metabolic process RNA metabolic process viral life cycle nucleobase-containing compound biosynthetic process macromolecule biosynthetic process RNA biosynthetic process nucleic acid biosynthetic process viral genome replication biosynthetic process viral RNA genome replication viral process transmembrane transport localization transport monoatomic ion transmembrane transport monoatomic ion transport establishment of localization gene expression DNA-templated transcription symbiont-mediated disruption of host anatomical structure biological process involved in interspecies interaction between organisms symbiont-mediated disruption of host cellular anatomical structure biological process involved in interaction with host biological process involved in symbiotic interaction symbiont-mediated perturbation of host membrane symbiont genome entry into host cell via pore formation in plasma membrane symbiont entry into host cell symbiont entry into host disruption of anatomical structure in another organism virion attachment to host cell adhesion of symbiont to host cell adhesion of symbiont to host endocytosis involved in viral entry into host cell symbiont-mediated perturbation of host cellular process symbiont-mediated perturbation of host process symbiont-mediated perturbation of host autophagy modulation of process of another organism symbiont-mediated activation of host autophagy symbiont-mediated perturbation of host defense response symbiont-mediated suppression of host cytoplasmic pattern recognition receptor signaling pathway via inhibition of RIG-I activity symbiont-mediated suppression of host pathogen-associated molecular pattern receptor signaling pathway symbiont-mediated perturbation of host immune response symbiont-mediated suppression of host signal transduction pathway symbiont-mediated suppression of host immune response symbiont-mediated suppression of host innate immune response symbiont-mediated perturbation of host innate immune response symbiont-mediated perturbation of host signal transduction pathway symbiont-mediated suppression of cytoplasmic pattern recognition receptor signaling pathway proteolysis protein metabolic process symbiont-mediated perturbation of host intracellular transport symbiont-mediated suppression of host mRNA export from nucleus symbiont-mediated suppression of host gene expression symbiont-mediated perturbation of host gene expression	cellular anatomical structure membrane host intracellular membrane-bounded organelle host cellular component host intracellular part host cell membrane host cell cytoplasmic vesicle membrane other organism part host cell cytoplasm part host intracellular organelle host cell cytoplasmic vesicle host cell cytoplasm host cell part host intracellular region cellular anatomical structure membrane host intracellular membrane-bounded organelle host cellular component host intracellular part host cell membrane host cell cytoplasmic vesicle membrane other organism part host cell cytoplasm part host intracellular organelle host cell cytoplasmic vesicle host cell cytoplasm host cell part host intracellular region viral capsid icosahedral viral capsid virion component T=pseudo3 icosahedral viral capsid host cell nucleus
AA [auth O], C [auth 3], CB [auth 6], EA [auth S], FB [auth AA], AA [auth O], C [auth 3], CB [auth 6], EA [auth S], FB [auth AA], G [auth C], IA [auth W], IB [auth AE], K [auth G], LB [auth AI], MA [auth e], O [auth a], OB [auth AM], QA [auth m], RB [auth AQ], S [auth i], TA [auth q], W [auth K], WA [auth u], ZA [auth y]	Capsid protein VP3	cysteine-type peptidase activity peptidase activity catalytic activity, acting on a protein cysteine-type endopeptidase activity hydrolase activity catalytic activity endopeptidase activity RNA-directed RNA polymerase activity 5'-3' RNA polymerase activity catalytic activity, acting on RNA catalytic activity, acting on a nucleic acid RNA polymerase activity transferase activity nucleotidyltransferase activity cysteine-type peptidase activity peptidase activity catalytic activity, acting on a protein cysteine-type endopeptidase activity hydrolase activity catalytic activity endopeptidase activity RNA-directed RNA polymerase activity 5'-3' RNA polymerase activity catalytic activity, acting on RNA catalytic activity, acting on a nucleic acid RNA polymerase activity transferase activity nucleotidyltransferase activity transferase activity, transferring phosphorus-containing groups RNA binding binding nucleic acid binding adenyl ribonucleotide binding nucleotide binding purine ribonucleotide binding purine ribonucleoside triphosphate binding nucleoside phosphate binding ion binding purine nucleotide binding anion binding adenyl nucleotide binding ATP binding heterocyclic compound binding carbohydrate derivative binding ribonucleotide binding small molecule binding pyrophosphatase activity ATP hydrolysis activity ribonucleoside triphosphate phosphatase activity hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides hydrolase activity, acting on acid anhydrides ATP-dependent activity passive transmembrane transporter activity channel activity transporter activity transmembrane transporter activity nucleic acid conformation isomerase activity isomerase activity helicase activity RNA helicase activity ATP-dependent activity, acting on RNA macromolecular conformation isomerase activity structural molecule activity cation binding transition metal ion binding zinc ion binding metal ion binding	nucleobase-containing compound metabolic process DNA replication metabolic process cellular process primary metabolic process DNA metabolic process macromolecule metabolic process nucleic acid metabolic process RNA metabolic process viral life cycle nucleobase-containing compound biosynthetic process macromolecule biosynthetic process RNA biosynthetic process nucleic acid biosynthetic process nucleobase-containing compound metabolic process DNA replication metabolic process cellular process primary metabolic process DNA metabolic process macromolecule metabolic process nucleic acid metabolic process RNA metabolic process viral life cycle nucleobase-containing compound biosynthetic process macromolecule biosynthetic process RNA biosynthetic process nucleic acid biosynthetic process viral genome replication biosynthetic process viral RNA genome replication viral process transmembrane transport localization transport monoatomic ion transmembrane transport monoatomic ion transport establishment of localization gene expression DNA-templated transcription symbiont-mediated disruption of host anatomical structure biological process involved in interspecies interaction between organisms symbiont-mediated disruption of host cellular anatomical structure biological process involved in interaction with host biological process involved in symbiotic interaction symbiont-mediated perturbation of host membrane symbiont genome entry into host cell via pore formation in plasma membrane symbiont entry into host cell symbiont entry into host disruption of anatomical structure in another organism virion attachment to host cell adhesion of symbiont to host cell adhesion of symbiont to host endocytosis involved in viral entry into host cell symbiont-mediated perturbation of host cellular process symbiont-mediated perturbation of host process symbiont-mediated perturbation of host autophagy modulation of process of another organism symbiont-mediated activation of host autophagy symbiont-mediated perturbation of host defense response symbiont-mediated suppression of host cytoplasmic pattern recognition receptor signaling pathway via inhibition of RIG-I activity symbiont-mediated suppression of host pathogen-associated molecular pattern receptor signaling pathway symbiont-mediated perturbation of host immune response symbiont-mediated suppression of host signal transduction pathway symbiont-mediated suppression of host immune response symbiont-mediated suppression of host innate immune response symbiont-mediated perturbation of host innate immune response symbiont-mediated perturbation of host signal transduction pathway symbiont-mediated suppression of cytoplasmic pattern recognition receptor signaling pathway proteolysis protein metabolic process symbiont-mediated perturbation of host intracellular transport symbiont-mediated suppression of host mRNA export from nucleus symbiont-mediated suppression of host gene expression symbiont-mediated perturbation of host gene expression	cellular anatomical structure membrane host intracellular membrane-bounded organelle host cellular component host intracellular part host cell membrane host cell cytoplasmic vesicle membrane other organism part host cell cytoplasm part host intracellular organelle host cell cytoplasmic vesicle host cell cytoplasm host cell part host intracellular region cellular anatomical structure membrane host intracellular membrane-bounded organelle host cellular component host intracellular part host cell membrane host cell cytoplasmic vesicle membrane other organism part host cell cytoplasm part host intracellular organelle host cell cytoplasmic vesicle host cell cytoplasm host cell part host intracellular region viral capsid icosahedral viral capsid virion component T=pseudo3 icosahedral viral capsid host cell nucleus
B [auth 2], BB [auth 5], DA [auth R], EB [auth 9], F [auth B], B [auth 2], BB [auth 5], DA [auth R], EB [auth 9], F [auth B], HA [auth V], HB [auth AD], J [auth F], KB [auth AH], LA [auth d], N [auth Z], NB [auth AL], PA [auth l], QB [auth AP], R [auth h], SA [auth p], V [auth J], VA [auth t], YA [auth x], Z [auth N]	Capsid protein VP2	cysteine-type peptidase activity peptidase activity catalytic activity, acting on a protein cysteine-type endopeptidase activity hydrolase activity catalytic activity endopeptidase activity RNA-directed RNA polymerase activity 5'-3' RNA polymerase activity catalytic activity, acting on RNA catalytic activity, acting on a nucleic acid RNA polymerase activity transferase activity nucleotidyltransferase activity cysteine-type peptidase activity peptidase activity catalytic activity, acting on a protein cysteine-type endopeptidase activity hydrolase activity catalytic activity endopeptidase activity RNA-directed RNA polymerase activity 5'-3' RNA polymerase activity catalytic activity, acting on RNA catalytic activity, acting on a nucleic acid RNA polymerase activity transferase activity nucleotidyltransferase activity transferase activity, transferring phosphorus-containing groups RNA binding binding nucleic acid binding adenyl ribonucleotide binding nucleotide binding purine ribonucleotide binding purine ribonucleoside triphosphate binding nucleoside phosphate binding ion binding purine nucleotide binding anion binding adenyl nucleotide binding ATP binding heterocyclic compound binding carbohydrate derivative binding ribonucleotide binding small molecule binding pyrophosphatase activity ATP hydrolysis activity ribonucleoside triphosphate phosphatase activity hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides hydrolase activity, acting on acid anhydrides ATP-dependent activity passive transmembrane transporter activity channel activity transporter activity transmembrane transporter activity nucleic acid conformation isomerase activity isomerase activity helicase activity RNA helicase activity ATP-dependent activity, acting on RNA macromolecular conformation isomerase activity structural molecule activity cation binding transition metal ion binding zinc ion binding metal ion binding	nucleobase-containing compound metabolic process DNA replication metabolic process cellular process primary metabolic process DNA metabolic process macromolecule metabolic process nucleic acid metabolic process RNA metabolic process viral life cycle nucleobase-containing compound biosynthetic process macromolecule biosynthetic process RNA biosynthetic process nucleic acid biosynthetic process nucleobase-containing compound metabolic process DNA replication metabolic process cellular process primary metabolic process DNA metabolic process macromolecule metabolic process nucleic acid metabolic process RNA metabolic process viral life cycle nucleobase-containing compound biosynthetic process macromolecule biosynthetic process RNA biosynthetic process nucleic acid biosynthetic process viral genome replication biosynthetic process viral RNA genome replication viral process transmembrane transport localization transport monoatomic ion transmembrane transport monoatomic ion transport establishment of localization gene expression DNA-templated transcription symbiont-mediated disruption of host anatomical structure biological process involved in interspecies interaction between organisms symbiont-mediated disruption of host cellular anatomical structure biological process involved in interaction with host biological process involved in symbiotic interaction symbiont-mediated perturbation of host membrane symbiont genome entry into host cell via pore formation in plasma membrane symbiont entry into host cell symbiont entry into host disruption of anatomical structure in another organism virion attachment to host cell adhesion of symbiont to host cell adhesion of symbiont to host endocytosis involved in viral entry into host cell symbiont-mediated perturbation of host cellular process symbiont-mediated perturbation of host process symbiont-mediated perturbation of host autophagy modulation of process of another organism symbiont-mediated activation of host autophagy symbiont-mediated perturbation of host defense response symbiont-mediated suppression of host cytoplasmic pattern recognition receptor signaling pathway via inhibition of RIG-I activity symbiont-mediated suppression of host pathogen-associated molecular pattern receptor signaling pathway symbiont-mediated perturbation of host immune response symbiont-mediated suppression of host signal transduction pathway symbiont-mediated suppression of host immune response symbiont-mediated suppression of host innate immune response symbiont-mediated perturbation of host innate immune response symbiont-mediated perturbation of host signal transduction pathway symbiont-mediated suppression of cytoplasmic pattern recognition receptor signaling pathway proteolysis protein metabolic process symbiont-mediated perturbation of host intracellular transport symbiont-mediated suppression of host mRNA export from nucleus symbiont-mediated suppression of host gene expression symbiont-mediated perturbation of host gene expression	cellular anatomical structure membrane host intracellular membrane-bounded organelle host cellular component host intracellular part host cell membrane host cell cytoplasmic vesicle membrane other organism part host cell cytoplasm part host intracellular organelle host cell cytoplasmic vesicle host cell cytoplasm host cell part host intracellular region cellular anatomical structure membrane host intracellular membrane-bounded organelle host cellular component host intracellular part host cell membrane host cell cytoplasmic vesicle membrane other organism part host cell cytoplasm part host intracellular organelle host cell cytoplasmic vesicle host cell cytoplasm host cell part host intracellular region viral capsid icosahedral viral capsid virion component T=pseudo3 icosahedral viral capsid host cell nucleus
A [auth 1], AB [auth 0], CA [auth Q], DB [auth 8], E [auth A], A [auth 1], AB [auth 0], CA [auth Q], DB [auth 8], E [auth A], GA [auth U], GB [auth AC], I [auth E], JB [auth AG], KA [auth c], M [auth Y], MB [auth AK], OA [auth k], PB [auth AO], Q [auth g], RA [auth o], U [auth I], UA [auth s], XA [auth w], Y [auth M]	Capsid protein VP1	cysteine-type peptidase activity peptidase activity catalytic activity, acting on a protein cysteine-type endopeptidase activity hydrolase activity catalytic activity endopeptidase activity RNA-directed RNA polymerase activity 5'-3' RNA polymerase activity catalytic activity, acting on RNA catalytic activity, acting on a nucleic acid RNA polymerase activity transferase activity nucleotidyltransferase activity cysteine-type peptidase activity peptidase activity catalytic activity, acting on a protein cysteine-type endopeptidase activity hydrolase activity catalytic activity endopeptidase activity RNA-directed RNA polymerase activity 5'-3' RNA polymerase activity catalytic activity, acting on RNA catalytic activity, acting on a nucleic acid RNA polymerase activity transferase activity nucleotidyltransferase activity transferase activity, transferring phosphorus-containing groups RNA binding binding nucleic acid binding adenyl ribonucleotide binding nucleotide binding purine ribonucleotide binding purine ribonucleoside triphosphate binding nucleoside phosphate binding ion binding purine nucleotide binding anion binding adenyl nucleotide binding ATP binding heterocyclic compound binding carbohydrate derivative binding ribonucleotide binding small molecule binding pyrophosphatase activity ATP hydrolysis activity ribonucleoside triphosphate phosphatase activity hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides hydrolase activity, acting on acid anhydrides ATP-dependent activity passive transmembrane transporter activity channel activity transporter activity transmembrane transporter activity nucleic acid conformation isomerase activity isomerase activity helicase activity RNA helicase activity ATP-dependent activity, acting on RNA macromolecular conformation isomerase activity structural molecule activity cation binding transition metal ion binding zinc ion binding metal ion binding	nucleobase-containing compound metabolic process DNA replication metabolic process cellular process primary metabolic process DNA metabolic process macromolecule metabolic process nucleic acid metabolic process RNA metabolic process viral life cycle nucleobase-containing compound biosynthetic process macromolecule biosynthetic process RNA biosynthetic process nucleic acid biosynthetic process nucleobase-containing compound metabolic process DNA replication metabolic process cellular process primary metabolic process DNA metabolic process macromolecule metabolic process nucleic acid metabolic process RNA metabolic process viral life cycle nucleobase-containing compound biosynthetic process macromolecule biosynthetic process RNA biosynthetic process nucleic acid biosynthetic process viral genome replication biosynthetic process viral RNA genome replication viral process transmembrane transport localization transport monoatomic ion transmembrane transport monoatomic ion transport establishment of localization gene expression DNA-templated transcription symbiont-mediated disruption of host anatomical structure biological process involved in interspecies interaction between organisms symbiont-mediated disruption of host cellular anatomical structure biological process involved in interaction with host biological process involved in symbiotic interaction symbiont-mediated perturbation of host membrane symbiont genome entry into host cell via pore formation in plasma membrane symbiont entry into host cell symbiont entry into host disruption of anatomical structure in another organism virion attachment to host cell adhesion of symbiont to host cell adhesion of symbiont to host endocytosis involved in viral entry into host cell symbiont-mediated perturbation of host cellular process symbiont-mediated perturbation of host process symbiont-mediated perturbation of host autophagy modulation of process of another organism symbiont-mediated activation of host autophagy symbiont-mediated perturbation of host defense response symbiont-mediated suppression of host cytoplasmic pattern recognition receptor signaling pathway via inhibition of RIG-I activity symbiont-mediated suppression of host pathogen-associated molecular pattern receptor signaling pathway symbiont-mediated perturbation of host immune response symbiont-mediated suppression of host signal transduction pathway symbiont-mediated suppression of host immune response symbiont-mediated suppression of host innate immune response symbiont-mediated perturbation of host innate immune response symbiont-mediated perturbation of host signal transduction pathway symbiont-mediated suppression of cytoplasmic pattern recognition receptor signaling pathway proteolysis protein metabolic process symbiont-mediated perturbation of host intracellular transport symbiont-mediated suppression of host mRNA export from nucleus symbiont-mediated suppression of host gene expression symbiont-mediated perturbation of host gene expression	cellular anatomical structure membrane host intracellular membrane-bounded organelle host cellular component host intracellular part host cell membrane host cell cytoplasmic vesicle membrane other organism part host cell cytoplasm part host intracellular organelle host cell cytoplasmic vesicle host cell cytoplasm host cell part host intracellular region cellular anatomical structure membrane host intracellular membrane-bounded organelle host cellular component host intracellular part host cell membrane host cell cytoplasmic vesicle membrane other organism part host cell cytoplasm part host intracellular organelle host cell cytoplasmic vesicle host cell cytoplasm host cell part host intracellular region viral capsid icosahedral viral capsid virion component T=pseudo3 icosahedral viral capsid host cell nucleus

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
BA [auth P], D [auth 4], FA [auth T], H [auth D], JA [auth X], BA [auth P], D [auth 4], FA [auth T], H [auth D], JA [auth X], L [auth H], NA [auth f], P [auth b], T [auth j], X [auth L]	IPR001205	RNA-directed RNA polymerase, C-terminal domain	Domain
BA [auth P], D [auth 4], FA [auth T], H [auth D], JA [auth X], BA [auth P], D [auth 4], FA [auth T], H [auth D], JA [auth X], L [auth H], NA [auth f], P [auth b], T [auth j], X [auth L]	IPR002527	Picornavirus 2B protein	Domain
BA [auth P], D [auth 4], FA [auth T], H [auth D], JA [auth X], BA [auth P], D [auth 4], FA [auth T], H [auth D], JA [auth X], L [auth H], NA [auth f], P [auth b], T [auth j], X [auth L]	IPR043128	Reverse transcriptase/Diguanylate cyclase domain	Homologous Superfamily
BA [auth P], D [auth 4], FA [auth T], H [auth D], JA [auth X], BA [auth P], D [auth 4], FA [auth T], H [auth D], JA [auth X], L [auth H], NA [auth f], P [auth b], T [auth j], X [auth L]	IPR036988	Picornavirus coat protein VP4 superfamily	Homologous Superfamily
BA [auth P], D [auth 4], FA [auth T], H [auth D], JA [auth X], BA [auth P], D [auth 4], FA [auth T], H [auth D], JA [auth X], L [auth H], NA [auth f], P [auth b], T [auth j], X [auth L]	IPR003593	AAA+ ATPase domain	Domain
BA [auth P], D [auth 4], FA [auth T], H [auth D], JA [auth X], BA [auth P], D [auth 4], FA [auth T], H [auth D], JA [auth X], L [auth H], NA [auth f], P [auth b], T [auth j], X [auth L]	IPR003138	Picornavirus coat protein VP4	Family
BA [auth P], D [auth 4], FA [auth T], H [auth D], JA [auth X], BA [auth P], D [auth 4], FA [auth T], H [auth D], JA [auth X], L [auth H], NA [auth f], P [auth b], T [auth j], X [auth L]	IPR000199	Peptidase C3A/C3B, picornaviral	Domain
BA [auth P], D [auth 4], FA [auth T], H [auth D], JA [auth X], BA [auth P], D [auth 4], FA [auth T], H [auth D], JA [auth X], L [auth H], NA [auth f], P [auth b], T [auth j], X [auth L]	IPR001676	Picornavirus capsid	Domain
BA [auth P], D [auth 4], FA [auth T], H [auth D], JA [auth X], BA [auth P], D [auth 4], FA [auth T], H [auth D], JA [auth X], L [auth H], NA [auth f], P [auth b], T [auth j], X [auth L]	IPR014759	Helicase, superfamily 3, single-stranded RNA virus	Domain
BA [auth P], D [auth 4], FA [auth T], H [auth D], JA [auth X], BA [auth P], D [auth 4], FA [auth T], H [auth D], JA [auth X], L [auth H], NA [auth f], P [auth b], T [auth j], X [auth L]	IPR027417	P-loop containing nucleoside triphosphate hydrolase	Homologous Superfamily
BA [auth P], D [auth 4], FA [auth T], H [auth D], JA [auth X], BA [auth P], D [auth 4], FA [auth T], H [auth D], JA [auth X], L [auth H], NA [auth f], P [auth b], T [auth j], X [auth L]	IPR000081	Peptidase C3, picornavirus core protein 2A	Domain
BA [auth P], D [auth 4], FA [auth T], H [auth D], JA [auth X], BA [auth P], D [auth 4], FA [auth T], H [auth D], JA [auth X], L [auth H], NA [auth f], P [auth b], T [auth j], X [auth L]	IPR029053	Viral coat protein subunit	Homologous Superfamily
BA [auth P], D [auth 4], FA [auth T], H [auth D], JA [auth X], BA [auth P], D [auth 4], FA [auth T], H [auth D], JA [auth X], L [auth H], NA [auth f], P [auth b], T [auth j], X [auth L]	IPR009003	Peptidase S1, PA clan	Homologous Superfamily
BA [auth P], D [auth 4], FA [auth T], H [auth D], JA [auth X], BA [auth P], D [auth 4], FA [auth T], H [auth D], JA [auth X], L [auth H], NA [auth f], P [auth b], T [auth j], X [auth L]	IPR043502	DNA/RNA polymerase superfamily	Homologous Superfamily
BA [auth P], D [auth 4], FA [auth T], H [auth D], JA [auth X], BA [auth P], D [auth 4], FA [auth T], H [auth D], JA [auth X], L [auth H], NA [auth f], P [auth b], T [auth j], X [auth L]	IPR044067	Picornavirales 3C/3C-like protease domain	Domain
BA [auth P], D [auth 4], FA [auth T], H [auth D], JA [auth X], BA [auth P], D [auth 4], FA [auth T], H [auth D], JA [auth X], L [auth H], NA [auth f], P [auth b], T [auth j], X [auth L]	IPR033703	Picornavirus/Calicivirus coat protein	Domain
BA [auth P], D [auth 4], FA [auth T], H [auth D], JA [auth X], BA [auth P], D [auth 4], FA [auth T], H [auth D], JA [auth X], L [auth H], NA [auth f], P [auth b], T [auth j], X [auth L]	IPR014838	Poliovirus 3A protein-like	Domain
BA [auth P], D [auth 4], FA [auth T], H [auth D], JA [auth X], BA [auth P], D [auth 4], FA [auth T], H [auth D], JA [auth X], L [auth H], NA [auth f], P [auth b], T [auth j], X [auth L]	IPR036203	Poliovirus core protein 3a, soluble domain	Homologous Superfamily
BA [auth P], D [auth 4], FA [auth T], H [auth D], JA [auth X], BA [auth P], D [auth 4], FA [auth T], H [auth D], JA [auth X], L [auth H], NA [auth f], P [auth b], T [auth j], X [auth L]	IPR043504	Peptidase S1, PA clan, chymotrypsin-like fold	Homologous Superfamily
BA [auth P], D [auth 4], FA [auth T], H [auth D], JA [auth X], BA [auth P], D [auth 4], FA [auth T], H [auth D], JA [auth X], L [auth H], NA [auth f], P [auth b], T [auth j], X [auth L]	IPR007094	RNA-directed RNA polymerase, catalytic domain	Domain
BA [auth P], D [auth 4], FA [auth T], H [auth D], JA [auth X], BA [auth P], D [auth 4], FA [auth T], H [auth D], JA [auth X], L [auth H], NA [auth f], P [auth b], T [auth j], X [auth L]	IPR000605	Helicase, superfamily 3, single-stranded DNA/RNA virus	Domain
AA [auth O], C [auth 3], CB [auth 6], EA [auth S], FB [auth AA], AA [auth O], C [auth 3], CB [auth 6], EA [auth S], FB [auth AA], G [auth C], IA [auth W], IB [auth AE], K [auth G], LB [auth AI], MA [auth e], O [auth a], OB [auth AM], QA [auth m], RB [auth AQ], S [auth i], TA [auth q], W [auth K], WA [auth u], ZA [auth y]	IPR001205	RNA-directed RNA polymerase, C-terminal domain	Domain
AA [auth O], C [auth 3], CB [auth 6], EA [auth S], FB [auth AA], AA [auth O], C [auth 3], CB [auth 6], EA [auth S], FB [auth AA], G [auth C], IA [auth W], IB [auth AE], K [auth G], LB [auth AI], MA [auth e], O [auth a], OB [auth AM], QA [auth m], RB [auth AQ], S [auth i], TA [auth q], W [auth K], WA [auth u], ZA [auth y]	IPR002527	Picornavirus 2B protein	Domain
AA [auth O], C [auth 3], CB [auth 6], EA [auth S], FB [auth AA], AA [auth O], C [auth 3], CB [auth 6], EA [auth S], FB [auth AA], G [auth C], IA [auth W], IB [auth AE], K [auth G], LB [auth AI], MA [auth e], O [auth a], OB [auth AM], QA [auth m], RB [auth AQ], S [auth i], TA [auth q], W [auth K], WA [auth u], ZA [auth y]	IPR043128	Reverse transcriptase/Diguanylate cyclase domain	Homologous Superfamily
AA [auth O], C [auth 3], CB [auth 6], EA [auth S], FB [auth AA], AA [auth O], C [auth 3], CB [auth 6], EA [auth S], FB [auth AA], G [auth C], IA [auth W], IB [auth AE], K [auth G], LB [auth AI], MA [auth e], O [auth a], OB [auth AM], QA [auth m], RB [auth AQ], S [auth i], TA [auth q], W [auth K], WA [auth u], ZA [auth y]	IPR036988	Picornavirus coat protein VP4 superfamily	Homologous Superfamily
AA [auth O], C [auth 3], CB [auth 6], EA [auth S], FB [auth AA], AA [auth O], C [auth 3], CB [auth 6], EA [auth S], FB [auth AA], G [auth C], IA [auth W], IB [auth AE], K [auth G], LB [auth AI], MA [auth e], O [auth a], OB [auth AM], QA [auth m], RB [auth AQ], S [auth i], TA [auth q], W [auth K], WA [auth u], ZA [auth y]	IPR003593	AAA+ ATPase domain	Domain
AA [auth O], C [auth 3], CB [auth 6], EA [auth S], FB [auth AA], AA [auth O], C [auth 3], CB [auth 6], EA [auth S], FB [auth AA], G [auth C], IA [auth W], IB [auth AE], K [auth G], LB [auth AI], MA [auth e], O [auth a], OB [auth AM], QA [auth m], RB [auth AQ], S [auth i], TA [auth q], W [auth K], WA [auth u], ZA [auth y]	IPR003138	Picornavirus coat protein VP4	Family
AA [auth O], C [auth 3], CB [auth 6], EA [auth S], FB [auth AA], AA [auth O], C [auth 3], CB [auth 6], EA [auth S], FB [auth AA], G [auth C], IA [auth W], IB [auth AE], K [auth G], LB [auth AI], MA [auth e], O [auth a], OB [auth AM], QA [auth m], RB [auth AQ], S [auth i], TA [auth q], W [auth K], WA [auth u], ZA [auth y]	IPR000199	Peptidase C3A/C3B, picornaviral	Domain
AA [auth O], C [auth 3], CB [auth 6], EA [auth S], FB [auth AA], AA [auth O], C [auth 3], CB [auth 6], EA [auth S], FB [auth AA], G [auth C], IA [auth W], IB [auth AE], K [auth G], LB [auth AI], MA [auth e], O [auth a], OB [auth AM], QA [auth m], RB [auth AQ], S [auth i], TA [auth q], W [auth K], WA [auth u], ZA [auth y]	IPR001676	Picornavirus capsid	Domain
AA [auth O], C [auth 3], CB [auth 6], EA [auth S], FB [auth AA], AA [auth O], C [auth 3], CB [auth 6], EA [auth S], FB [auth AA], G [auth C], IA [auth W], IB [auth AE], K [auth G], LB [auth AI], MA [auth e], O [auth a], OB [auth AM], QA [auth m], RB [auth AQ], S [auth i], TA [auth q], W [auth K], WA [auth u], ZA [auth y]	IPR014759	Helicase, superfamily 3, single-stranded RNA virus	Domain
AA [auth O], C [auth 3], CB [auth 6], EA [auth S], FB [auth AA], AA [auth O], C [auth 3], CB [auth 6], EA [auth S], FB [auth AA], G [auth C], IA [auth W], IB [auth AE], K [auth G], LB [auth AI], MA [auth e], O [auth a], OB [auth AM], QA [auth m], RB [auth AQ], S [auth i], TA [auth q], W [auth K], WA [auth u], ZA [auth y]	IPR027417	P-loop containing nucleoside triphosphate hydrolase	Homologous Superfamily
AA [auth O], C [auth 3], CB [auth 6], EA [auth S], FB [auth AA], AA [auth O], C [auth 3], CB [auth 6], EA [auth S], FB [auth AA], G [auth C], IA [auth W], IB [auth AE], K [auth G], LB [auth AI], MA [auth e], O [auth a], OB [auth AM], QA [auth m], RB [auth AQ], S [auth i], TA [auth q], W [auth K], WA [auth u], ZA [auth y]	IPR000081	Peptidase C3, picornavirus core protein 2A	Domain
AA [auth O], C [auth 3], CB [auth 6], EA [auth S], FB [auth AA], AA [auth O], C [auth 3], CB [auth 6], EA [auth S], FB [auth AA], G [auth C], IA [auth W], IB [auth AE], K [auth G], LB [auth AI], MA [auth e], O [auth a], OB [auth AM], QA [auth m], RB [auth AQ], S [auth i], TA [auth q], W [auth K], WA [auth u], ZA [auth y]	IPR029053	Viral coat protein subunit	Homologous Superfamily
AA [auth O], C [auth 3], CB [auth 6], EA [auth S], FB [auth AA], AA [auth O], C [auth 3], CB [auth 6], EA [auth S], FB [auth AA], G [auth C], IA [auth W], IB [auth AE], K [auth G], LB [auth AI], MA [auth e], O [auth a], OB [auth AM], QA [auth m], RB [auth AQ], S [auth i], TA [auth q], W [auth K], WA [auth u], ZA [auth y]	IPR009003	Peptidase S1, PA clan	Homologous Superfamily
AA [auth O], C [auth 3], CB [auth 6], EA [auth S], FB [auth AA], AA [auth O], C [auth 3], CB [auth 6], EA [auth S], FB [auth AA], G [auth C], IA [auth W], IB [auth AE], K [auth G], LB [auth AI], MA [auth e], O [auth a], OB [auth AM], QA [auth m], RB [auth AQ], S [auth i], TA [auth q], W [auth K], WA [auth u], ZA [auth y]	IPR043502	DNA/RNA polymerase superfamily	Homologous Superfamily
AA [auth O], C [auth 3], CB [auth 6], EA [auth S], FB [auth AA], AA [auth O], C [auth 3], CB [auth 6], EA [auth S], FB [auth AA], G [auth C], IA [auth W], IB [auth AE], K [auth G], LB [auth AI], MA [auth e], O [auth a], OB [auth AM], QA [auth m], RB [auth AQ], S [auth i], TA [auth q], W [auth K], WA [auth u], ZA [auth y]	IPR044067	Picornavirales 3C/3C-like protease domain	Domain
AA [auth O], C [auth 3], CB [auth 6], EA [auth S], FB [auth AA], AA [auth O], C [auth 3], CB [auth 6], EA [auth S], FB [auth AA], G [auth C], IA [auth W], IB [auth AE], K [auth G], LB [auth AI], MA [auth e], O [auth a], OB [auth AM], QA [auth m], RB [auth AQ], S [auth i], TA [auth q], W [auth K], WA [auth u], ZA [auth y]	IPR033703	Picornavirus/Calicivirus coat protein	Domain
AA [auth O], C [auth 3], CB [auth 6], EA [auth S], FB [auth AA], AA [auth O], C [auth 3], CB [auth 6], EA [auth S], FB [auth AA], G [auth C], IA [auth W], IB [auth AE], K [auth G], LB [auth AI], MA [auth e], O [auth a], OB [auth AM], QA [auth m], RB [auth AQ], S [auth i], TA [auth q], W [auth K], WA [auth u], ZA [auth y]	IPR014838	Poliovirus 3A protein-like	Domain
AA [auth O], C [auth 3], CB [auth 6], EA [auth S], FB [auth AA], AA [auth O], C [auth 3], CB [auth 6], EA [auth S], FB [auth AA], G [auth C], IA [auth W], IB [auth AE], K [auth G], LB [auth AI], MA [auth e], O [auth a], OB [auth AM], QA [auth m], RB [auth AQ], S [auth i], TA [auth q], W [auth K], WA [auth u], ZA [auth y]	IPR036203	Poliovirus core protein 3a, soluble domain	Homologous Superfamily
AA [auth O], C [auth 3], CB [auth 6], EA [auth S], FB [auth AA], AA [auth O], C [auth 3], CB [auth 6], EA [auth S], FB [auth AA], G [auth C], IA [auth W], IB [auth AE], K [auth G], LB [auth AI], MA [auth e], O [auth a], OB [auth AM], QA [auth m], RB [auth AQ], S [auth i], TA [auth q], W [auth K], WA [auth u], ZA [auth y]	IPR043504	Peptidase S1, PA clan, chymotrypsin-like fold	Homologous Superfamily
AA [auth O], C [auth 3], CB [auth 6], EA [auth S], FB [auth AA], AA [auth O], C [auth 3], CB [auth 6], EA [auth S], FB [auth AA], G [auth C], IA [auth W], IB [auth AE], K [auth G], LB [auth AI], MA [auth e], O [auth a], OB [auth AM], QA [auth m], RB [auth AQ], S [auth i], TA [auth q], W [auth K], WA [auth u], ZA [auth y]	IPR007094	RNA-directed RNA polymerase, catalytic domain	Domain
AA [auth O], C [auth 3], CB [auth 6], EA [auth S], FB [auth AA], AA [auth O], C [auth 3], CB [auth 6], EA [auth S], FB [auth AA], G [auth C], IA [auth W], IB [auth AE], K [auth G], LB [auth AI], MA [auth e], O [auth a], OB [auth AM], QA [auth m], RB [auth AQ], S [auth i], TA [auth q], W [auth K], WA [auth u], ZA [auth y]	IPR000605	Helicase, superfamily 3, single-stranded DNA/RNA virus	Domain
B [auth 2], BB [auth 5], DA [auth R], EB [auth 9], F [auth B], B [auth 2], BB [auth 5], DA [auth R], EB [auth 9], F [auth B], HA [auth V], HB [auth AD], J [auth F], KB [auth AH], LA [auth d], N [auth Z], NB [auth AL], PA [auth l], QB [auth AP], R [auth h], SA [auth p], V [auth J], VA [auth t], YA [auth x], Z [auth N]	IPR001205	RNA-directed RNA polymerase, C-terminal domain	Domain
B [auth 2], BB [auth 5], DA [auth R], EB [auth 9], F [auth B], B [auth 2], BB [auth 5], DA [auth R], EB [auth 9], F [auth B], HA [auth V], HB [auth AD], J [auth F], KB [auth AH], LA [auth d], N [auth Z], NB [auth AL], PA [auth l], QB [auth AP], R [auth h], SA [auth p], V [auth J], VA [auth t], YA [auth x], Z [auth N]	IPR002527	Picornavirus 2B protein	Domain
B [auth 2], BB [auth 5], DA [auth R], EB [auth 9], F [auth B], B [auth 2], BB [auth 5], DA [auth R], EB [auth 9], F [auth B], HA [auth V], HB [auth AD], J [auth F], KB [auth AH], LA [auth d], N [auth Z], NB [auth AL], PA [auth l], QB [auth AP], R [auth h], SA [auth p], V [auth J], VA [auth t], YA [auth x], Z [auth N]	IPR043128	Reverse transcriptase/Diguanylate cyclase domain	Homologous Superfamily
B [auth 2], BB [auth 5], DA [auth R], EB [auth 9], F [auth B], B [auth 2], BB [auth 5], DA [auth R], EB [auth 9], F [auth B], HA [auth V], HB [auth AD], J [auth F], KB [auth AH], LA [auth d], N [auth Z], NB [auth AL], PA [auth l], QB [auth AP], R [auth h], SA [auth p], V [auth J], VA [auth t], YA [auth x], Z [auth N]	IPR036988	Picornavirus coat protein VP4 superfamily	Homologous Superfamily
B [auth 2], BB [auth 5], DA [auth R], EB [auth 9], F [auth B], B [auth 2], BB [auth 5], DA [auth R], EB [auth 9], F [auth B], HA [auth V], HB [auth AD], J [auth F], KB [auth AH], LA [auth d], N [auth Z], NB [auth AL], PA [auth l], QB [auth AP], R [auth h], SA [auth p], V [auth J], VA [auth t], YA [auth x], Z [auth N]	IPR003593	AAA+ ATPase domain	Domain
B [auth 2], BB [auth 5], DA [auth R], EB [auth 9], F [auth B], B [auth 2], BB [auth 5], DA [auth R], EB [auth 9], F [auth B], HA [auth V], HB [auth AD], J [auth F], KB [auth AH], LA [auth d], N [auth Z], NB [auth AL], PA [auth l], QB [auth AP], R [auth h], SA [auth p], V [auth J], VA [auth t], YA [auth x], Z [auth N]	IPR003138	Picornavirus coat protein VP4	Family
B [auth 2], BB [auth 5], DA [auth R], EB [auth 9], F [auth B], B [auth 2], BB [auth 5], DA [auth R], EB [auth 9], F [auth B], HA [auth V], HB [auth AD], J [auth F], KB [auth AH], LA [auth d], N [auth Z], NB [auth AL], PA [auth l], QB [auth AP], R [auth h], SA [auth p], V [auth J], VA [auth t], YA [auth x], Z [auth N]	IPR000199	Peptidase C3A/C3B, picornaviral	Domain
B [auth 2], BB [auth 5], DA [auth R], EB [auth 9], F [auth B], B [auth 2], BB [auth 5], DA [auth R], EB [auth 9], F [auth B], HA [auth V], HB [auth AD], J [auth F], KB [auth AH], LA [auth d], N [auth Z], NB [auth AL], PA [auth l], QB [auth AP], R [auth h], SA [auth p], V [auth J], VA [auth t], YA [auth x], Z [auth N]	IPR001676	Picornavirus capsid	Domain
B [auth 2], BB [auth 5], DA [auth R], EB [auth 9], F [auth B], B [auth 2], BB [auth 5], DA [auth R], EB [auth 9], F [auth B], HA [auth V], HB [auth AD], J [auth F], KB [auth AH], LA [auth d], N [auth Z], NB [auth AL], PA [auth l], QB [auth AP], R [auth h], SA [auth p], V [auth J], VA [auth t], YA [auth x], Z [auth N]	IPR014759	Helicase, superfamily 3, single-stranded RNA virus	Domain
B [auth 2], BB [auth 5], DA [auth R], EB [auth 9], F [auth B], B [auth 2], BB [auth 5], DA [auth R], EB [auth 9], F [auth B], HA [auth V], HB [auth AD], J [auth F], KB [auth AH], LA [auth d], N [auth Z], NB [auth AL], PA [auth l], QB [auth AP], R [auth h], SA [auth p], V [auth J], VA [auth t], YA [auth x], Z [auth N]	IPR027417	P-loop containing nucleoside triphosphate hydrolase	Homologous Superfamily
B [auth 2], BB [auth 5], DA [auth R], EB [auth 9], F [auth B], B [auth 2], BB [auth 5], DA [auth R], EB [auth 9], F [auth B], HA [auth V], HB [auth AD], J [auth F], KB [auth AH], LA [auth d], N [auth Z], NB [auth AL], PA [auth l], QB [auth AP], R [auth h], SA [auth p], V [auth J], VA [auth t], YA [auth x], Z [auth N]	IPR000081	Peptidase C3, picornavirus core protein 2A	Domain
B [auth 2], BB [auth 5], DA [auth R], EB [auth 9], F [auth B], B [auth 2], BB [auth 5], DA [auth R], EB [auth 9], F [auth B], HA [auth V], HB [auth AD], J [auth F], KB [auth AH], LA [auth d], N [auth Z], NB [auth AL], PA [auth l], QB [auth AP], R [auth h], SA [auth p], V [auth J], VA [auth t], YA [auth x], Z [auth N]	IPR029053	Viral coat protein subunit	Homologous Superfamily
B [auth 2], BB [auth 5], DA [auth R], EB [auth 9], F [auth B], B [auth 2], BB [auth 5], DA [auth R], EB [auth 9], F [auth B], HA [auth V], HB [auth AD], J [auth F], KB [auth AH], LA [auth d], N [auth Z], NB [auth AL], PA [auth l], QB [auth AP], R [auth h], SA [auth p], V [auth J], VA [auth t], YA [auth x], Z [auth N]	IPR009003	Peptidase S1, PA clan	Homologous Superfamily
B [auth 2], BB [auth 5], DA [auth R], EB [auth 9], F [auth B], B [auth 2], BB [auth 5], DA [auth R], EB [auth 9], F [auth B], HA [auth V], HB [auth AD], J [auth F], KB [auth AH], LA [auth d], N [auth Z], NB [auth AL], PA [auth l], QB [auth AP], R [auth h], SA [auth p], V [auth J], VA [auth t], YA [auth x], Z [auth N]	IPR043502	DNA/RNA polymerase superfamily	Homologous Superfamily
B [auth 2], BB [auth 5], DA [auth R], EB [auth 9], F [auth B], B [auth 2], BB [auth 5], DA [auth R], EB [auth 9], F [auth B], HA [auth V], HB [auth AD], J [auth F], KB [auth AH], LA [auth d], N [auth Z], NB [auth AL], PA [auth l], QB [auth AP], R [auth h], SA [auth p], V [auth J], VA [auth t], YA [auth x], Z [auth N]	IPR044067	Picornavirales 3C/3C-like protease domain	Domain
B [auth 2], BB [auth 5], DA [auth R], EB [auth 9], F [auth B], B [auth 2], BB [auth 5], DA [auth R], EB [auth 9], F [auth B], HA [auth V], HB [auth AD], J [auth F], KB [auth AH], LA [auth d], N [auth Z], NB [auth AL], PA [auth l], QB [auth AP], R [auth h], SA [auth p], V [auth J], VA [auth t], YA [auth x], Z [auth N]	IPR033703	Picornavirus/Calicivirus coat protein	Domain
B [auth 2], BB [auth 5], DA [auth R], EB [auth 9], F [auth B], B [auth 2], BB [auth 5], DA [auth R], EB [auth 9], F [auth B], HA [auth V], HB [auth AD], J [auth F], KB [auth AH], LA [auth d], N [auth Z], NB [auth AL], PA [auth l], QB [auth AP], R [auth h], SA [auth p], V [auth J], VA [auth t], YA [auth x], Z [auth N]	IPR014838	Poliovirus 3A protein-like	Domain
B [auth 2], BB [auth 5], DA [auth R], EB [auth 9], F [auth B], B [auth 2], BB [auth 5], DA [auth R], EB [auth 9], F [auth B], HA [auth V], HB [auth AD], J [auth F], KB [auth AH], LA [auth d], N [auth Z], NB [auth AL], PA [auth l], QB [auth AP], R [auth h], SA [auth p], V [auth J], VA [auth t], YA [auth x], Z [auth N]	IPR036203	Poliovirus core protein 3a, soluble domain	Homologous Superfamily
B [auth 2], BB [auth 5], DA [auth R], EB [auth 9], F [auth B], B [auth 2], BB [auth 5], DA [auth R], EB [auth 9], F [auth B], HA [auth V], HB [auth AD], J [auth F], KB [auth AH], LA [auth d], N [auth Z], NB [auth AL], PA [auth l], QB [auth AP], R [auth h], SA [auth p], V [auth J], VA [auth t], YA [auth x], Z [auth N]	IPR043504	Peptidase S1, PA clan, chymotrypsin-like fold	Homologous Superfamily
B [auth 2], BB [auth 5], DA [auth R], EB [auth 9], F [auth B], B [auth 2], BB [auth 5], DA [auth R], EB [auth 9], F [auth B], HA [auth V], HB [auth AD], J [auth F], KB [auth AH], LA [auth d], N [auth Z], NB [auth AL], PA [auth l], QB [auth AP], R [auth h], SA [auth p], V [auth J], VA [auth t], YA [auth x], Z [auth N]	IPR007094	RNA-directed RNA polymerase, catalytic domain	Domain
B [auth 2], BB [auth 5], DA [auth R], EB [auth 9], F [auth B], B [auth 2], BB [auth 5], DA [auth R], EB [auth 9], F [auth B], HA [auth V], HB [auth AD], J [auth F], KB [auth AH], LA [auth d], N [auth Z], NB [auth AL], PA [auth l], QB [auth AP], R [auth h], SA [auth p], V [auth J], VA [auth t], YA [auth x], Z [auth N]	IPR000605	Helicase, superfamily 3, single-stranded DNA/RNA virus	Domain
A [auth 1], AB [auth 0], CA [auth Q], DB [auth 8], E [auth A], A [auth 1], AB [auth 0], CA [auth Q], DB [auth 8], E [auth A], GA [auth U], GB [auth AC], I [auth E], JB [auth AG], KA [auth c], M [auth Y], MB [auth AK], OA [auth k], PB [auth AO], Q [auth g], RA [auth o], U [auth I], UA [auth s], XA [auth w], Y [auth M]	IPR001205	RNA-directed RNA polymerase, C-terminal domain	Domain
A [auth 1], AB [auth 0], CA [auth Q], DB [auth 8], E [auth A], A [auth 1], AB [auth 0], CA [auth Q], DB [auth 8], E [auth A], GA [auth U], GB [auth AC], I [auth E], JB [auth AG], KA [auth c], M [auth Y], MB [auth AK], OA [auth k], PB [auth AO], Q [auth g], RA [auth o], U [auth I], UA [auth s], XA [auth w], Y [auth M]	IPR002527	Picornavirus 2B protein	Domain
A [auth 1], AB [auth 0], CA [auth Q], DB [auth 8], E [auth A], A [auth 1], AB [auth 0], CA [auth Q], DB [auth 8], E [auth A], GA [auth U], GB [auth AC], I [auth E], JB [auth AG], KA [auth c], M [auth Y], MB [auth AK], OA [auth k], PB [auth AO], Q [auth g], RA [auth o], U [auth I], UA [auth s], XA [auth w], Y [auth M]	IPR043128	Reverse transcriptase/Diguanylate cyclase domain	Homologous Superfamily
A [auth 1], AB [auth 0], CA [auth Q], DB [auth 8], E [auth A], A [auth 1], AB [auth 0], CA [auth Q], DB [auth 8], E [auth A], GA [auth U], GB [auth AC], I [auth E], JB [auth AG], KA [auth c], M [auth Y], MB [auth AK], OA [auth k], PB [auth AO], Q [auth g], RA [auth o], U [auth I], UA [auth s], XA [auth w], Y [auth M]	IPR036988	Picornavirus coat protein VP4 superfamily	Homologous Superfamily
A [auth 1], AB [auth 0], CA [auth Q], DB [auth 8], E [auth A], A [auth 1], AB [auth 0], CA [auth Q], DB [auth 8], E [auth A], GA [auth U], GB [auth AC], I [auth E], JB [auth AG], KA [auth c], M [auth Y], MB [auth AK], OA [auth k], PB [auth AO], Q [auth g], RA [auth o], U [auth I], UA [auth s], XA [auth w], Y [auth M]	IPR003593	AAA+ ATPase domain	Domain
A [auth 1], AB [auth 0], CA [auth Q], DB [auth 8], E [auth A], A [auth 1], AB [auth 0], CA [auth Q], DB [auth 8], E [auth A], GA [auth U], GB [auth AC], I [auth E], JB [auth AG], KA [auth c], M [auth Y], MB [auth AK], OA [auth k], PB [auth AO], Q [auth g], RA [auth o], U [auth I], UA [auth s], XA [auth w], Y [auth M]	IPR003138	Picornavirus coat protein VP4	Family
A [auth 1], AB [auth 0], CA [auth Q], DB [auth 8], E [auth A], A [auth 1], AB [auth 0], CA [auth Q], DB [auth 8], E [auth A], GA [auth U], GB [auth AC], I [auth E], JB [auth AG], KA [auth c], M [auth Y], MB [auth AK], OA [auth k], PB [auth AO], Q [auth g], RA [auth o], U [auth I], UA [auth s], XA [auth w], Y [auth M]	IPR000199	Peptidase C3A/C3B, picornaviral	Domain
A [auth 1], AB [auth 0], CA [auth Q], DB [auth 8], E [auth A], A [auth 1], AB [auth 0], CA [auth Q], DB [auth 8], E [auth A], GA [auth U], GB [auth AC], I [auth E], JB [auth AG], KA [auth c], M [auth Y], MB [auth AK], OA [auth k], PB [auth AO], Q [auth g], RA [auth o], U [auth I], UA [auth s], XA [auth w], Y [auth M]	IPR001676	Picornavirus capsid	Domain
A [auth 1], AB [auth 0], CA [auth Q], DB [auth 8], E [auth A], A [auth 1], AB [auth 0], CA [auth Q], DB [auth 8], E [auth A], GA [auth U], GB [auth AC], I [auth E], JB [auth AG], KA [auth c], M [auth Y], MB [auth AK], OA [auth k], PB [auth AO], Q [auth g], RA [auth o], U [auth I], UA [auth s], XA [auth w], Y [auth M]	IPR014759	Helicase, superfamily 3, single-stranded RNA virus	Domain
A [auth 1], AB [auth 0], CA [auth Q], DB [auth 8], E [auth A], A [auth 1], AB [auth 0], CA [auth Q], DB [auth 8], E [auth A], GA [auth U], GB [auth AC], I [auth E], JB [auth AG], KA [auth c], M [auth Y], MB [auth AK], OA [auth k], PB [auth AO], Q [auth g], RA [auth o], U [auth I], UA [auth s], XA [auth w], Y [auth M]	IPR027417	P-loop containing nucleoside triphosphate hydrolase	Homologous Superfamily
A [auth 1], AB [auth 0], CA [auth Q], DB [auth 8], E [auth A], A [auth 1], AB [auth 0], CA [auth Q], DB [auth 8], E [auth A], GA [auth U], GB [auth AC], I [auth E], JB [auth AG], KA [auth c], M [auth Y], MB [auth AK], OA [auth k], PB [auth AO], Q [auth g], RA [auth o], U [auth I], UA [auth s], XA [auth w], Y [auth M]	IPR000081	Peptidase C3, picornavirus core protein 2A	Domain
A [auth 1], AB [auth 0], CA [auth Q], DB [auth 8], E [auth A], A [auth 1], AB [auth 0], CA [auth Q], DB [auth 8], E [auth A], GA [auth U], GB [auth AC], I [auth E], JB [auth AG], KA [auth c], M [auth Y], MB [auth AK], OA [auth k], PB [auth AO], Q [auth g], RA [auth o], U [auth I], UA [auth s], XA [auth w], Y [auth M]	IPR029053	Viral coat protein subunit	Homologous Superfamily
A [auth 1], AB [auth 0], CA [auth Q], DB [auth 8], E [auth A], A [auth 1], AB [auth 0], CA [auth Q], DB [auth 8], E [auth A], GA [auth U], GB [auth AC], I [auth E], JB [auth AG], KA [auth c], M [auth Y], MB [auth AK], OA [auth k], PB [auth AO], Q [auth g], RA [auth o], U [auth I], UA [auth s], XA [auth w], Y [auth M]	IPR009003	Peptidase S1, PA clan	Homologous Superfamily
A [auth 1], AB [auth 0], CA [auth Q], DB [auth 8], E [auth A], A [auth 1], AB [auth 0], CA [auth Q], DB [auth 8], E [auth A], GA [auth U], GB [auth AC], I [auth E], JB [auth AG], KA [auth c], M [auth Y], MB [auth AK], OA [auth k], PB [auth AO], Q [auth g], RA [auth o], U [auth I], UA [auth s], XA [auth w], Y [auth M]	IPR043502	DNA/RNA polymerase superfamily	Homologous Superfamily
A [auth 1], AB [auth 0], CA [auth Q], DB [auth 8], E [auth A], A [auth 1], AB [auth 0], CA [auth Q], DB [auth 8], E [auth A], GA [auth U], GB [auth AC], I [auth E], JB [auth AG], KA [auth c], M [auth Y], MB [auth AK], OA [auth k], PB [auth AO], Q [auth g], RA [auth o], U [auth I], UA [auth s], XA [auth w], Y [auth M]	IPR044067	Picornavirales 3C/3C-like protease domain	Domain
A [auth 1], AB [auth 0], CA [auth Q], DB [auth 8], E [auth A], A [auth 1], AB [auth 0], CA [auth Q], DB [auth 8], E [auth A], GA [auth U], GB [auth AC], I [auth E], JB [auth AG], KA [auth c], M [auth Y], MB [auth AK], OA [auth k], PB [auth AO], Q [auth g], RA [auth o], U [auth I], UA [auth s], XA [auth w], Y [auth M]	IPR033703	Picornavirus/Calicivirus coat protein	Domain
A [auth 1], AB [auth 0], CA [auth Q], DB [auth 8], E [auth A], A [auth 1], AB [auth 0], CA [auth Q], DB [auth 8], E [auth A], GA [auth U], GB [auth AC], I [auth E], JB [auth AG], KA [auth c], M [auth Y], MB [auth AK], OA [auth k], PB [auth AO], Q [auth g], RA [auth o], U [auth I], UA [auth s], XA [auth w], Y [auth M]	IPR014838	Poliovirus 3A protein-like	Domain
A [auth 1], AB [auth 0], CA [auth Q], DB [auth 8], E [auth A], A [auth 1], AB [auth 0], CA [auth Q], DB [auth 8], E [auth A], GA [auth U], GB [auth AC], I [auth E], JB [auth AG], KA [auth c], M [auth Y], MB [auth AK], OA [auth k], PB [auth AO], Q [auth g], RA [auth o], U [auth I], UA [auth s], XA [auth w], Y [auth M]	IPR036203	Poliovirus core protein 3a, soluble domain	Homologous Superfamily
A [auth 1], AB [auth 0], CA [auth Q], DB [auth 8], E [auth A], A [auth 1], AB [auth 0], CA [auth Q], DB [auth 8], E [auth A], GA [auth U], GB [auth AC], I [auth E], JB [auth AG], KA [auth c], M [auth Y], MB [auth AK], OA [auth k], PB [auth AO], Q [auth g], RA [auth o], U [auth I], UA [auth s], XA [auth w], Y [auth M]	IPR043504	Peptidase S1, PA clan, chymotrypsin-like fold	Homologous Superfamily
A [auth 1], AB [auth 0], CA [auth Q], DB [auth 8], E [auth A], A [auth 1], AB [auth 0], CA [auth Q], DB [auth 8], E [auth A], GA [auth U], GB [auth AC], I [auth E], JB [auth AG], KA [auth c], M [auth Y], MB [auth AK], OA [auth k], PB [auth AO], Q [auth g], RA [auth o], U [auth I], UA [auth s], XA [auth w], Y [auth M]	IPR007094	RNA-directed RNA polymerase, catalytic domain	Domain
A [auth 1], AB [auth 0], CA [auth Q], DB [auth 8], E [auth A], A [auth 1], AB [auth 0], CA [auth Q], DB [auth 8], E [auth A], GA [auth U], GB [auth AC], I [auth E], JB [auth AG], KA [auth c], M [auth Y], MB [auth AK], OA [auth k], PB [auth AO], Q [auth g], RA [auth o], U [auth I], UA [auth s], XA [auth w], Y [auth M]	IPR000605	Helicase, superfamily 3, single-stranded DNA/RNA virus	Domain